Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GFI1Q99684 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GFI1Q99684 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.57□□□□□ -0.4
GFI1Q99684 SOCS2P1-201ENST00000417727 557 ntBASIC12.57□□□□□ -0.4
GFI1Q99684 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC12.57□□□□□ -0.4
GFI1Q99684 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC12.57□□□□□ -0.4
GFI1Q99684 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GFI1Q99684 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.57□□□□□ -0.4
GFI1Q99684 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.57□□□□□ -0.4
GFI1Q99684 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.57□□□□□ -0.4
GFI1Q99684 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
GFI1Q99684 AC138466.3-201ENST00000619983 221 ntBASIC12.57□□□□□ -0.4
GFI1Q99684 AC004623.1-201ENST00000624592 2127 ntBASIC12.57□□□□□ -0.4
GFI1Q99684 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.57□□□□□ -0.4
GFI1Q99684 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
GFI1Q99684 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GFI1Q99684 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GFI1Q99684 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GFI1Q99684 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GFI1Q99684 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.57□□□□□ -0.4
GFI1Q99684 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GFI1Q99684 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
GFI1Q99684 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.57□□□□□ -0.4
GFI1Q99684 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GFI1Q99684 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.57□□□□□ -0.4
GFI1Q99684 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GFI1Q99684 AL031719.1-201ENST00000623365 2587 ntBASIC12.57□□□□□ -0.4
GFI1Q99684 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.57□□□□□ -0.4
GFI1Q99684 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GFI1Q99684 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GFI1Q99684 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.57□□□□□ -0.4
GFI1Q99684 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GFI1Q99684 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.57□□□□□ -0.4
GFI1Q99684 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
GFI1Q99684 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.56□□□□□ -0.4
GFI1Q99684 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
GFI1Q99684 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
GFI1Q99684 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.56□□□□□ -0.4
GFI1Q99684 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.56□□□□□ -0.4
GFI1Q99684 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
GFI1Q99684 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
GFI1Q99684 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
GFI1Q99684 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
GFI1Q99684 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
GFI1Q99684 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
GFI1Q99684 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
GFI1Q99684 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.56□□□□□ -0.4
GFI1Q99684 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.56□□□□□ -0.4
GFI1Q99684 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.56□□□□□ -0.4
GFI1Q99684 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
GFI1Q99684 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
GFI1Q99684 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
GFI1Q99684 AC098850.1-201ENST00000419919 790 ntBASIC12.56□□□□□ -0.4
GFI1Q99684 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC12.56□□□□□ -0.4
GFI1Q99684 FAM86GP-201ENST00000448322 971 ntBASIC12.56□□□□□ -0.4
GFI1Q99684 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.56□□□□□ -0.4
GFI1Q99684 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.56□□□□□ -0.4
GFI1Q99684 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC12.56□□□□□ -0.4
GFI1Q99684 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.56□□□□□ -0.4
GFI1Q99684 AC005586.2-201ENST00000563946 837 ntBASIC12.56□□□□□ -0.4
GFI1Q99684 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.56□□□□□ -0.4
GFI1Q99684 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC12.56□□□□□ -0.4
GFI1Q99684 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC12.56□□□□□ -0.4
GFI1Q99684 CLUHP6-201ENST00000580789 941 ntBASIC12.56□□□□□ -0.4
GFI1Q99684 KRT18P8-201ENST00000581937 1246 ntBASIC12.56□□□□□ -0.4
GFI1Q99684 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC12.56□□□□□ -0.4
GFI1Q99684 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
GFI1Q99684 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12.56□□□□□ -0.4
GFI1Q99684 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
GFI1Q99684 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.56□□□□□ -0.4
GFI1Q99684 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.56□□□□□ -0.4
GFI1Q99684 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
GFI1Q99684 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.56□□□□□ -0.4
GFI1Q99684 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
GFI1Q99684 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
GFI1Q99684 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
GFI1Q99684 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
GFI1Q99684 FKBP4P6-201ENST00000457486 1332 ntBASIC12.56□□□□□ -0.4
GFI1Q99684 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
GFI1Q99684 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
GFI1Q99684 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
GFI1Q99684 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
GFI1Q99684 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
GFI1Q99684 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
GFI1Q99684 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
GFI1Q99684 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
GFI1Q99684 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
GFI1Q99684 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
GFI1Q99684 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
GFI1Q99684 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.56□□□□□ -0.4
GFI1Q99684 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
GFI1Q99684 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GFI1Q99684 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
GFI1Q99684 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
GFI1Q99684 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
GFI1Q99684 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
GFI1Q99684 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.55□□□□□ -0.4
GFI1Q99684 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
GFI1Q99684 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GFI1Q99684 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms