Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.22□□□□□ -0.13
PKP4Q99569 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
PKP4Q99569 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PKP4Q99569 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PKP4Q99569 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
PKP4Q99569 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PKP4Q99569 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PKP4Q99569 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.21□□□□□ -0.13
PKP4Q99569 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PKP4Q99569 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
PKP4Q99569 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.21□□□□□ -0.13
PKP4Q99569 BTBD6P1-201ENST00000412176 1267 ntBASIC14.21□□□□□ -0.13
PKP4Q99569 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.21□□□□□ -0.13
PKP4Q99569 RPS2P32-201ENST00000439199 892 ntBASIC14.21□□□□□ -0.13
PKP4Q99569 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.21□□□□□ -0.13
PKP4Q99569 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PKP4Q99569 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.21□□□□□ -0.13
PKP4Q99569 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
PKP4Q99569 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.21□□□□□ -0.13
PKP4Q99569 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.21□□□□□ -0.13
PKP4Q99569 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.21□□□□□ -0.13
PKP4Q99569 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.21□□□□□ -0.13
PKP4Q99569 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.21□□□□□ -0.13
PKP4Q99569 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
PKP4Q99569 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.21□□□□□ -0.13
PKP4Q99569 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
PKP4Q99569 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PKP4Q99569 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.21□□□□□ -0.13
PKP4Q99569 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.21□□□□□ -0.13
PKP4Q99569 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PKP4Q99569 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PKP4Q99569 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PKP4Q99569 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PKP4Q99569 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PKP4Q99569 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
PKP4Q99569 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.21□□□□□ -0.14
PKP4Q99569 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.21□□□□□ -0.14
PKP4Q99569 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.21□□□□□ -0.14
PKP4Q99569 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PKP4Q99569 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.21□□□□□ -0.14
PKP4Q99569 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.21□□□□□ -0.14
PKP4Q99569 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PKP4Q99569 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PKP4Q99569 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.2□□□□□ -0.14
PKP4Q99569 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PKP4Q99569 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PKP4Q99569 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PKP4Q99569 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PKP4Q99569 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PKP4Q99569 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.2□□□□□ -0.14
PKP4Q99569 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PKP4Q99569 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PKP4Q99569 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PKP4Q99569 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PKP4Q99569 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PKP4Q99569 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PKP4Q99569 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
PKP4Q99569 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PKP4Q99569 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PKP4Q99569 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
PKP4Q99569 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PKP4Q99569 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PKP4Q99569 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PKP4Q99569 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PKP4Q99569 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
PKP4Q99569 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.2□□□□□ -0.14
PKP4Q99569 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.2□□□□□ -0.14
PKP4Q99569 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.2□□□□□ -0.14
PKP4Q99569 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
PKP4Q99569 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.2□□□□□ -0.14
PKP4Q99569 AC005730.2-201ENST00000564549 1184 ntBASIC14.2□□□□□ -0.14
PKP4Q99569 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.2□□□□□ -0.14
PKP4Q99569 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.2□□□□□ -0.14
PKP4Q99569 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.2□□□□□ -0.14
PKP4Q99569 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.2□□□□□ -0.14
PKP4Q99569 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PKP4Q99569 AL096828.3-201ENST00000615354 462 ntBASIC14.2□□□□□ -0.14
PKP4Q99569 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
PKP4Q99569 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.2□□□□□ -0.14
PKP4Q99569 Z98259.2-201ENST00000641583 609 ntBASIC14.2□□□□□ -0.14
PKP4Q99569 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PKP4Q99569 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PKP4Q99569 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.2□□□□□ -0.14
PKP4Q99569 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PKP4Q99569 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.2□□□□□ -0.14
PKP4Q99569 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PKP4Q99569 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PKP4Q99569 GRK6P1-201ENST00000400595 1711 ntBASIC14.2□□□□□ -0.14
PKP4Q99569 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
PKP4Q99569 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PKP4Q99569 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PKP4Q99569 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PKP4Q99569 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PKP4Q99569 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PKP4Q99569 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PKP4Q99569 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PKP4Q99569 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PKP4Q99569 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PKP4Q99569 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
PKP4Q99569 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms