Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 MIR6074-201ENST00000612054 107 ntBASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 AP005019.2-201ENST00000615104 511 ntBASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 FAM207CP-201ENST00000443486 507 ntBASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 KRT17P7-201ENST00000451704 1104 ntBASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 AC099568.2-201ENST00000609194 695 ntBASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHAMP1Q96JM3 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 AC093004.1-201ENST00000508850 424 ntBASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 AC104596.2-201ENST00000512793 793 ntBASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 AP003171.2-201ENST00000528208 925 ntBASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 WFDC1-204ENST00000613603 549 ntBASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms