Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 AL157996.1-201ENST00000624684 2299 ntBASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 KLF2P1-201ENST00000447438 1042 ntBASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 KRT18P15-201ENST00000458108 1291 ntBASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 ACA64.2-201ENST00000459014 129 ntBASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 SNX29P1-201ENST00000548357 1007 ntBASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 AP005482.1-201ENST00000563722 1273 ntBASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 BAP1-211ENST00000615113 489 ntBASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 AC090386.2-201ENST00000623010 1039 ntBASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 AC023794.5-201ENST00000564380 2157 ntBASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 AC097376.2-205ENST00000610159 5334 ntBASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.2□□□□□ -0.14
PDLIM5Q96HC4 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 AC003686.1-201ENST00000550956 1034 ntBASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 AC100827.2-201ENST00000563214 1194 ntBASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 AC124068.2-201ENST00000569473 1109 ntBASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms