Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AL603764.1-201ENST00000636452 321 ntBASIC17.39■□□□□ 0.37
DDX11Q96FC9 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC17.39■□□□□ 0.37
DDX11Q96FC9 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.39■□□□□ 0.37
DDX11Q96FC9 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
DDX11Q96FC9 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DDX11Q96FC9 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
DDX11Q96FC9 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC17.38■□□□□ 0.37
DDX11Q96FC9 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX11Q96FC9 AC152010.1-201ENST00000415779 2006 ntBASIC17.38■□□□□ 0.37
DDX11Q96FC9 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.38■□□□□ 0.37
DDX11Q96FC9 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.38■□□□□ 0.37
DDX11Q96FC9 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC17.38■□□□□ 0.37
DDX11Q96FC9 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX11Q96FC9 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DDX11Q96FC9 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DDX11Q96FC9 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX11Q96FC9 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
DDX11Q96FC9 RN7SKP230-201ENST00000365642 335 ntBASIC17.38■□□□□ 0.37
DDX11Q96FC9 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX11Q96FC9 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.38■□□□□ 0.37
DDX11Q96FC9 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.38■□□□□ 0.37
DDX11Q96FC9 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.38■□□□□ 0.37
DDX11Q96FC9 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DDX11Q96FC9 ACTG1P17-201ENST00000558391 1119 ntBASIC17.38■□□□□ 0.37
DDX11Q96FC9 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.38■□□□□ 0.37
DDX11Q96FC9 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.38■□□□□ 0.37
DDX11Q96FC9 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
DDX11Q96FC9 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX11Q96FC9 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
DDX11Q96FC9 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX11Q96FC9 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC17.38■□□□□ 0.37
DDX11Q96FC9 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX11Q96FC9 CLUHP2-201ENST00000426660 1303 ntBASIC17.38■□□□□ 0.37
DDX11Q96FC9 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX11Q96FC9 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.38■□□□□ 0.37
DDX11Q96FC9 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX11Q96FC9 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX11Q96FC9 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.38■□□□□ 0.37
DDX11Q96FC9 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX11Q96FC9 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DDX11Q96FC9 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC17.38■□□□□ 0.37
DDX11Q96FC9 AC006504.5-208ENST00000588784 2401 ntBASIC17.38■□□□□ 0.37
DDX11Q96FC9 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX11Q96FC9 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX11Q96FC9 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX11Q96FC9 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX11Q96FC9 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX11Q96FC9 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DDX11Q96FC9 KRT8P4-201ENST00000509735 1454 ntBASIC17.37■□□□□ 0.37
DDX11Q96FC9 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
DDX11Q96FC9 AC011840.2-201ENST00000563063 1520 ntBASIC17.37■□□□□ 0.37
DDX11Q96FC9 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DDX11Q96FC9 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.37■□□□□ 0.37
DDX11Q96FC9 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.37■□□□□ 0.37
DDX11Q96FC9 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DDX11Q96FC9 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DDX11Q96FC9 OS9-204ENST00000389146 2091 ntTSL 2 BASIC17.37■□□□□ 0.37
DDX11Q96FC9 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC17.37■□□□□ 0.37
DDX11Q96FC9 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DDX11Q96FC9 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.37■□□□□ 0.37
DDX11Q96FC9 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.37■□□□□ 0.37
DDX11Q96FC9 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DDX11Q96FC9 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
DDX11Q96FC9 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.37■□□□□ 0.37
DDX11Q96FC9 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DDX11Q96FC9 AC126915.1-201ENST00000522847 1038 ntBASIC17.37■□□□□ 0.37
DDX11Q96FC9 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.37■□□□□ 0.37
DDX11Q96FC9 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DDX11Q96FC9 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.37■□□□□ 0.37
DDX11Q96FC9 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.37■□□□□ 0.37
DDX11Q96FC9 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.37■□□□□ 0.37
DDX11Q96FC9 ZACNP1-201ENST00000612259 710 ntBASIC17.37■□□□□ 0.37
DDX11Q96FC9 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
DDX11Q96FC9 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DDX11Q96FC9 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DDX11Q96FC9 AL138725.1-201ENST00000407347 1314 ntBASIC17.37■□□□□ 0.37
DDX11Q96FC9 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.37■□□□□ 0.37
DDX11Q96FC9 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DDX11Q96FC9 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
DDX11Q96FC9 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DDX11Q96FC9 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
DDX11Q96FC9 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DDX11Q96FC9 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
DDX11Q96FC9 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DDX11Q96FC9 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DDX11Q96FC9 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC17.37■□□□□ 0.37
DDX11Q96FC9 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DDX11Q96FC9 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DDX11Q96FC9 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DDX11Q96FC9 AC018735.1-201ENST00000437208 1502 ntBASIC17.37■□□□□ 0.37
DDX11Q96FC9 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.37■□□□□ 0.37
DDX11Q96FC9 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
DDX11Q96FC9 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
DDX11Q96FC9 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DDX11Q96FC9 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DDX11Q96FC9 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DDX11Q96FC9 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC17.36■□□□□ 0.37
DDX11Q96FC9 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC17.36■□□□□ 0.37
DDX11Q96FC9 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
DDX11Q96FC9 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms