Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 AC136621.1-201ENST00000624017 2304 ntBASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM43Q96BQ3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 AC138761.6-201ENST00000583997 1423 ntBASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 AP000244.1-201ENST00000424582 201 ntBASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 HNRNPA1P2-207ENST00000432375 960 ntBASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 RN7SL128P-201ENST00000467883 305 ntBASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 AC087203.1-201ENST00000532111 1181 ntBASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 AC139713.2-207ENST00000641556 1292 ntBASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 ACE3P-201ENST00000423435 1973 ntBASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
TRIM43Q96BQ3 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 AL365203.3-201ENST00000609742 2057 ntBASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 WASH7P-201ENST00000488147 1351 ntBASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 AC027612.2-202ENST00000445955 1199 ntBASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 BATF-202ENST00000555504 361 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 FBXO36P1-201ENST00000579006 471 ntBASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 AC005274.1-201ENST00000623460 802 ntBASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.53■□□□□ 0.08
TRIM43Q96BQ3 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM43Q96BQ3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms