Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC009477.1-201ENST00000452936 217 ntBASIC13.02□□□□□ -0.33
RFT1Q96AA3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.02□□□□□ -0.33
RFT1Q96AA3 AC104794.3-201ENST00000566840 1248 ntBASIC13.02□□□□□ -0.33
RFT1Q96AA3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.02□□□□□ -0.33
RFT1Q96AA3 AC107373.2-201ENST00000607735 490 ntBASIC13.02□□□□□ -0.33
RFT1Q96AA3 AC023511.2-201ENST00000618803 211 ntBASIC13.02□□□□□ -0.33
RFT1Q96AA3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.02□□□□□ -0.33
RFT1Q96AA3 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.02□□□□□ -0.33
RFT1Q96AA3 AC004840.1-201ENST00000636359 365 ntBASIC13.02□□□□□ -0.33
RFT1Q96AA3 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RFT1Q96AA3 KRT18P28-201ENST00000453838 1332 ntBASIC13.02□□□□□ -0.33
RFT1Q96AA3 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.02□□□□□ -0.33
RFT1Q96AA3 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RFT1Q96AA3 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RFT1Q96AA3 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
RFT1Q96AA3 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RFT1Q96AA3 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RFT1Q96AA3 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
RFT1Q96AA3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RFT1Q96AA3 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.02□□□□□ -0.33
RFT1Q96AA3 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RFT1Q96AA3 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
RFT1Q96AA3 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
RFT1Q96AA3 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RFT1Q96AA3 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RFT1Q96AA3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RFT1Q96AA3 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RFT1Q96AA3 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.02□□□□□ -0.33
RFT1Q96AA3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RFT1Q96AA3 AL158070.2-201ENST00000623713 1621 ntBASIC13.02□□□□□ -0.33
RFT1Q96AA3 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RFT1Q96AA3 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
RFT1Q96AA3 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
RFT1Q96AA3 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.02□□□□□ -0.33
RFT1Q96AA3 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RFT1Q96AA3 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.02□□□□□ -0.33
RFT1Q96AA3 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
RFT1Q96AA3 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RFT1Q96AA3 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFT1Q96AA3 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RFT1Q96AA3 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.01□□□□□ -0.33
RFT1Q96AA3 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFT1Q96AA3 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.01□□□□□ -0.33
RFT1Q96AA3 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.01□□□□□ -0.33
RFT1Q96AA3 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFT1Q96AA3 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFT1Q96AA3 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
RFT1Q96AA3 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RFT1Q96AA3 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.01□□□□□ -0.33
RFT1Q96AA3 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.01□□□□□ -0.33
RFT1Q96AA3 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RFT1Q96AA3 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFT1Q96AA3 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFT1Q96AA3 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFT1Q96AA3 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFT1Q96AA3 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFT1Q96AA3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFT1Q96AA3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.01□□□□□ -0.33
RFT1Q96AA3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.01□□□□□ -0.33
RFT1Q96AA3 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.01□□□□□ -0.33
RFT1Q96AA3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.01□□□□□ -0.33
RFT1Q96AA3 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.01□□□□□ -0.33
RFT1Q96AA3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.01□□□□□ -0.33
RFT1Q96AA3 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.01□□□□□ -0.33
RFT1Q96AA3 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.01□□□□□ -0.33
RFT1Q96AA3 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.01□□□□□ -0.33
RFT1Q96AA3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.01□□□□□ -0.33
RFT1Q96AA3 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.01□□□□□ -0.33
RFT1Q96AA3 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.01□□□□□ -0.33
RFT1Q96AA3 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.01□□□□□ -0.33
RFT1Q96AA3 SRD5A3P1-201ENST00000603021 949 ntBASIC13.01□□□□□ -0.33
RFT1Q96AA3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.01□□□□□ -0.33
RFT1Q96AA3 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.01□□□□□ -0.33
RFT1Q96AA3 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFT1Q96AA3 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.01□□□□□ -0.33
RFT1Q96AA3 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFT1Q96AA3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFT1Q96AA3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RFT1Q96AA3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.01□□□□□ -0.33
RFT1Q96AA3 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.01□□□□□ -0.33
RFT1Q96AA3 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
RFT1Q96AA3 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFT1Q96AA3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.01□□□□□ -0.33
RFT1Q96AA3 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RFT1Q96AA3 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.01□□□□□ -0.33
RFT1Q96AA3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFT1Q96AA3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFT1Q96AA3 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFT1Q96AA3 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.01□□□□□ -0.33
RFT1Q96AA3 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFT1Q96AA3 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RFT1Q96AA3 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RFT1Q96AA3 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
RFT1Q96AA3 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFT1Q96AA3 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFT1Q96AA3 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFT1Q96AA3 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13□□□□□ -0.33
RFT1Q96AA3 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RFT1Q96AA3 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RFT1Q96AA3 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms