Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM54Q969K7 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.8□□□□□ -0.36
TMEM54Q969K7 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
TMEM54Q969K7 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TMEM54Q969K7 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM54Q969K7 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TMEM54Q969K7 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM54Q969K7 KRT18P36-201ENST00000411618 1276 ntBASIC12.8□□□□□ -0.36
TMEM54Q969K7 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TMEM54Q969K7 APOA2-204ENST00000464492 530 ntTSL 3 BASIC12.8□□□□□ -0.36
TMEM54Q969K7 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.8□□□□□ -0.36
TMEM54Q969K7 SCARNA21-201ENST00000517026 139 ntBASIC12.8□□□□□ -0.36
TMEM54Q969K7 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC12.8□□□□□ -0.36
TMEM54Q969K7 AC022217.1-201ENST00000521069 738 ntBASIC12.8□□□□□ -0.36
TMEM54Q969K7 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC12.8□□□□□ -0.36
TMEM54Q969K7 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12.8□□□□□ -0.36
TMEM54Q969K7 AC008805.1-201ENST00000590892 364 ntBASIC12.8□□□□□ -0.36
TMEM54Q969K7 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
TMEM54Q969K7 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM54Q969K7 AC022748.3-201ENST00000621828 275 ntBASIC12.8□□□□□ -0.36
TMEM54Q969K7 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC12.8□□□□□ -0.36
TMEM54Q969K7 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.8□□□□□ -0.36
TMEM54Q969K7 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.8□□□□□ -0.36
TMEM54Q969K7 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.8□□□□□ -0.36
TMEM54Q969K7 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM54Q969K7 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TMEM54Q969K7 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM54Q969K7 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.8□□□□□ -0.36
TMEM54Q969K7 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
TMEM54Q969K7 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM54Q969K7 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TMEM54Q969K7 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM54Q969K7 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM54Q969K7 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TMEM54Q969K7 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TMEM54Q969K7 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM54Q969K7 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM54Q969K7 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM54Q969K7 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TMEM54Q969K7 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM54Q969K7 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM54Q969K7 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM54Q969K7 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TMEM54Q969K7 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM54Q969K7 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM54Q969K7 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM54Q969K7 AL359881.3-201ENST00000602640 1721 ntBASIC12.79□□□□□ -0.36
TMEM54Q969K7 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM54Q969K7 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM54Q969K7 AC011474.4-201ENST00000623523 2076 ntBASIC12.79□□□□□ -0.36
TMEM54Q969K7 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM54Q969K7 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM54Q969K7 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM54Q969K7 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM54Q969K7 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 RPS2P32-201ENST00000439199 892 ntBASIC12.79□□□□□ -0.36
TMEM54Q969K7 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM54Q969K7 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 HLA-J-204ENST00000495278 958 ntBASIC12.79□□□□□ -0.36
TMEM54Q969K7 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 FAM8A2P-201ENST00000528813 1142 ntBASIC12.79□□□□□ -0.36
TMEM54Q969K7 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 PGAM1P5-201ENST00000548011 764 ntBASIC12.79□□□□□ -0.36
TMEM54Q969K7 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM54Q969K7 AC104982.3-201ENST00000581995 514 ntBASIC12.79□□□□□ -0.36
TMEM54Q969K7 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 AC007663.3-201ENST00000609632 465 ntBASIC12.79□□□□□ -0.36
TMEM54Q969K7 DIO1-215ENST00000610607 796 ntTSL 5 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 AC005695.3-201ENST00000614522 232 ntBASIC12.79□□□□□ -0.36
TMEM54Q969K7 PRKN-211ENST00000615065 261 ntTSL 5 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM54Q969K7 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 AC090386.2-201ENST00000623010 1039 ntBASIC12.79□□□□□ -0.36
TMEM54Q969K7 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM54Q969K7 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms