Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
STAG1Q8WVM7 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
STAG1Q8WVM7 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
STAG1Q8WVM7 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
STAG1Q8WVM7 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
STAG1Q8WVM7 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
STAG1Q8WVM7 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.08■□□□□ 0.33
STAG1Q8WVM7 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.08■□□□□ 0.33
STAG1Q8WVM7 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC17.08■□□□□ 0.33
STAG1Q8WVM7 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
STAG1Q8WVM7 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
STAG1Q8WVM7 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC17.08■□□□□ 0.32
STAG1Q8WVM7 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
STAG1Q8WVM7 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
STAG1Q8WVM7 AC092580.1-201ENST00000433998 658 ntBASIC17.08■□□□□ 0.32
STAG1Q8WVM7 RN7SL11P-201ENST00000471305 293 ntBASIC17.08■□□□□ 0.32
STAG1Q8WVM7 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC17.08■□□□□ 0.32
STAG1Q8WVM7 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.08■□□□□ 0.32
STAG1Q8WVM7 CHMP4BP1-201ENST00000556017 588 ntBASIC17.08■□□□□ 0.32
STAG1Q8WVM7 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC17.08■□□□□ 0.32
STAG1Q8WVM7 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.08■□□□□ 0.32
STAG1Q8WVM7 AC084346.2-201ENST00000607097 949 ntBASIC17.08■□□□□ 0.32
STAG1Q8WVM7 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
STAG1Q8WVM7 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
STAG1Q8WVM7 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
STAG1Q8WVM7 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
STAG1Q8WVM7 AC005089.1-201ENST00000619486 2241 ntBASIC17.08■□□□□ 0.32
STAG1Q8WVM7 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.08■□□□□ 0.32
STAG1Q8WVM7 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC17.08■□□□□ 0.32
STAG1Q8WVM7 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
STAG1Q8WVM7 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
STAG1Q8WVM7 HSPA7-201ENST00000445535 1927 ntBASIC17.08■□□□□ 0.32
STAG1Q8WVM7 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 ACTG1P2-201ENST00000415776 1125 ntBASIC17.07■□□□□ 0.32
STAG1Q8WVM7 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 ACTG1P11-201ENST00000425411 1125 ntBASIC17.07■□□□□ 0.32
STAG1Q8WVM7 Z97180.1-201ENST00000445173 988 ntBASIC17.07■□□□□ 0.32
STAG1Q8WVM7 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 RHOQP1-201ENST00000555758 579 ntBASIC17.07■□□□□ 0.32
STAG1Q8WVM7 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 MIR3188-201ENST00000583494 85 ntBASIC17.07■□□□□ 0.32
STAG1Q8WVM7 AC097724.1-201ENST00000609581 426 ntBASIC17.07■□□□□ 0.32
STAG1Q8WVM7 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 AL022313.4-201ENST00000562756 2046 ntBASIC17.07■□□□□ 0.32
STAG1Q8WVM7 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 FLJ16779-201ENST00000612722 7638 ntBASIC17.07■□□□□ 0.32
STAG1Q8WVM7 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms