Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDKL3Q8IVW4 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDKL3Q8IVW4 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CDKL3Q8IVW4 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CDKL3Q8IVW4 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CDKL3Q8IVW4 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 AC087386.2-201ENST00000623212 4637 ntBASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 MIR1202-201ENST00000408529 83 ntBASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 AC112492.5-201ENST00000421897 457 ntBASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 AL355994.2-201ENST00000447882 704 ntBASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 TMEM198B-204ENST00000484016 896 ntBASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 KRT8P4-201ENST00000509735 1454 ntBASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 AC010327.5-201ENST00000586923 3061 ntBASIC15.01□□□□□ -0.01
CDKL3Q8IVW4 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CDKL3Q8IVW4 AC090643.2-201ENST00000623442 2029 ntBASIC15□□□□□ -0.01
CDKL3Q8IVW4 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CDKL3Q8IVW4 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDKL3Q8IVW4 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15□□□□□ -0.01
CDKL3Q8IVW4 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDKL3Q8IVW4 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15□□□□□ -0.01
CDKL3Q8IVW4 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDKL3Q8IVW4 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDKL3Q8IVW4 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15□□□□□ -0.01
CDKL3Q8IVW4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15□□□□□ -0.01
CDKL3Q8IVW4 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDKL3Q8IVW4 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDKL3Q8IVW4 HNRNPA1P27-201ENST00000412087 955 ntBASIC15□□□□□ -0.01
CDKL3Q8IVW4 COX5BP8-201ENST00000416911 349 ntBASIC15□□□□□ -0.01
CDKL3Q8IVW4 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CDKL3Q8IVW4 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15□□□□□ -0.01
CDKL3Q8IVW4 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDKL3Q8IVW4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15□□□□□ -0.01
CDKL3Q8IVW4 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15□□□□□ -0.01
CDKL3Q8IVW4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15□□□□□ -0.01
CDKL3Q8IVW4 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15□□□□□ -0.01
CDKL3Q8IVW4 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15□□□□□ -0.01
CDKL3Q8IVW4 PPY2P-201ENST00000582808 702 ntBASIC15□□□□□ -0.01
CDKL3Q8IVW4 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDKL3Q8IVW4 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15□□□□□ -0.01
CDKL3Q8IVW4 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15□□□□□ -0.01
CDKL3Q8IVW4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15□□□□□ -0.01
CDKL3Q8IVW4 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15□□□□□ -0.01
CDKL3Q8IVW4 AL136301.1-201ENST00000615830 422 ntBASIC15□□□□□ -0.01
CDKL3Q8IVW4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15□□□□□ -0.01
CDKL3Q8IVW4 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDKL3Q8IVW4 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15□□□□□ -0.01
CDKL3Q8IVW4 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 209.7 ms