Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VRK2Q86Y07 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.52□□□□□ -0.25
VRK2Q86Y07 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VRK2Q86Y07 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.52□□□□□ -0.25
VRK2Q86Y07 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
VRK2Q86Y07 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VRK2Q86Y07 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
VRK2Q86Y07 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
VRK2Q86Y07 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VRK2Q86Y07 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VRK2Q86Y07 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VRK2Q86Y07 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
VRK2Q86Y07 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VRK2Q86Y07 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.52□□□□□ -0.25
VRK2Q86Y07 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
VRK2Q86Y07 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.52□□□□□ -0.25
VRK2Q86Y07 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VRK2Q86Y07 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
VRK2Q86Y07 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.52□□□□□ -0.25
VRK2Q86Y07 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.52□□□□□ -0.25
VRK2Q86Y07 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
VRK2Q86Y07 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VRK2Q86Y07 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VRK2Q86Y07 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VRK2Q86Y07 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VRK2Q86Y07 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
VRK2Q86Y07 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VRK2Q86Y07 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VRK2Q86Y07 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.51□□□□□ -0.25
VRK2Q86Y07 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.51□□□□□ -0.25
VRK2Q86Y07 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.51□□□□□ -0.25
VRK2Q86Y07 AC090643.2-201ENST00000623442 2029 ntBASIC13.51□□□□□ -0.25
VRK2Q86Y07 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
VRK2Q86Y07 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
VRK2Q86Y07 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.51□□□□□ -0.25
VRK2Q86Y07 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VRK2Q86Y07 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VRK2Q86Y07 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VRK2Q86Y07 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
VRK2Q86Y07 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VRK2Q86Y07 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VRK2Q86Y07 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
VRK2Q86Y07 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.51□□□□□ -0.25
VRK2Q86Y07 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VRK2Q86Y07 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VRK2Q86Y07 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.51□□□□□ -0.25
VRK2Q86Y07 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.51□□□□□ -0.25
VRK2Q86Y07 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.51□□□□□ -0.25
VRK2Q86Y07 CD8B2-202ENST00000417670 633 ntBASIC13.51□□□□□ -0.25
VRK2Q86Y07 ARSEP1-201ENST00000420443 635 ntBASIC13.51□□□□□ -0.25
VRK2Q86Y07 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VRK2Q86Y07 CNN2P8-201ENST00000421872 913 ntBASIC13.51□□□□□ -0.25
VRK2Q86Y07 CICP12-201ENST00000455801 843 ntBASIC13.51□□□□□ -0.25
VRK2Q86Y07 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.51□□□□□ -0.25
VRK2Q86Y07 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.51□□□□□ -0.25
VRK2Q86Y07 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.51□□□□□ -0.25
VRK2Q86Y07 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VRK2Q86Y07 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
VRK2Q86Y07 KRT90P-201ENST00000549264 1064 ntBASIC13.51□□□□□ -0.25
VRK2Q86Y07 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
VRK2Q86Y07 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.51□□□□□ -0.25
VRK2Q86Y07 AC027237.1-201ENST00000560942 655 ntBASIC13.51□□□□□ -0.25
VRK2Q86Y07 RN7SL713P-201ENST00000582127 302 ntBASIC13.51□□□□□ -0.25
VRK2Q86Y07 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.51□□□□□ -0.25
VRK2Q86Y07 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.51□□□□□ -0.25
VRK2Q86Y07 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.51□□□□□ -0.25
VRK2Q86Y07 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.51□□□□□ -0.25
VRK2Q86Y07 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VRK2Q86Y07 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VRK2Q86Y07 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VRK2Q86Y07 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VRK2Q86Y07 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
VRK2Q86Y07 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
VRK2Q86Y07 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VRK2Q86Y07 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VRK2Q86Y07 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.51□□□□□ -0.25
VRK2Q86Y07 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.51□□□□□ -0.25
VRK2Q86Y07 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
VRK2Q86Y07 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VRK2Q86Y07 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
VRK2Q86Y07 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VRK2Q86Y07 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VRK2Q86Y07 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
VRK2Q86Y07 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VRK2Q86Y07 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VRK2Q86Y07 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
VRK2Q86Y07 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.5□□□□□ -0.25
VRK2Q86Y07 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.5□□□□□ -0.25
VRK2Q86Y07 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VRK2Q86Y07 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VRK2Q86Y07 KRT8P4-201ENST00000509735 1454 ntBASIC13.5□□□□□ -0.25
VRK2Q86Y07 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VRK2Q86Y07 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.5□□□□□ -0.25
VRK2Q86Y07 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.5□□□□□ -0.25
VRK2Q86Y07 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VRK2Q86Y07 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VRK2Q86Y07 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
VRK2Q86Y07 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VRK2Q86Y07 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VRK2Q86Y07 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms