Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LRRTM4Q86VH4 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 AC018629.1-201ENST00000623381 1736 ntBASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 RN7SKP214-201ENST00000364208 315 ntBASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 MIR769-201ENST00000390225 118 ntBASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 KRT18P36-201ENST00000411618 1276 ntBASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 XBP1P1-201ENST00000436573 652 ntBASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 ST13P19-201ENST00000442505 1124 ntBASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 AL139099.5-201ENST00000635274 300 ntBASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRRTM4Q86VH4 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LRRTM4Q86VH4 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.29□□□□□ -0.12
LRRTM4Q86VH4 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM4Q86VH4 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.29□□□□□ -0.12
LRRTM4Q86VH4 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM4Q86VH4 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM4Q86VH4 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM4Q86VH4 AP001267.2-201ENST00000532619 2086 ntBASIC14.29□□□□□ -0.12
LRRTM4Q86VH4 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LRRTM4Q86VH4 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM4Q86VH4 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LRRTM4Q86VH4 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM4Q86VH4 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM4Q86VH4 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.29□□□□□ -0.12
LRRTM4Q86VH4 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
LRRTM4Q86VH4 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.29□□□□□ -0.12
LRRTM4Q86VH4 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.29□□□□□ -0.12
LRRTM4Q86VH4 AC005077.2-201ENST00000449786 690 ntBASIC14.29□□□□□ -0.12
LRRTM4Q86VH4 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.29□□□□□ -0.12
LRRTM4Q86VH4 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.29□□□□□ -0.12
LRRTM4Q86VH4 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM4Q86VH4 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.29□□□□□ -0.12
LRRTM4Q86VH4 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRRTM4Q86VH4 PGAM1P5-201ENST00000548011 764 ntBASIC14.29□□□□□ -0.12
LRRTM4Q86VH4 AC003686.1-201ENST00000550956 1034 ntBASIC14.29□□□□□ -0.12
LRRTM4Q86VH4 ACTG1P17-201ENST00000558391 1119 ntBASIC14.29□□□□□ -0.12
LRRTM4Q86VH4 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.29□□□□□ -0.12
LRRTM4Q86VH4 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.29□□□□□ -0.12
LRRTM4Q86VH4 AC124068.2-201ENST00000569473 1109 ntBASIC14.29□□□□□ -0.12
LRRTM4Q86VH4 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.29□□□□□ -0.12
LRRTM4Q86VH4 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.29□□□□□ -0.12
LRRTM4Q86VH4 AC092299.1-201ENST00000632679 757 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms