Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 KRT43P-201ENST00000434019 910 ntBASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 BNIP3P42-201ENST00000454982 569 ntBASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 AC025048.3-201ENST00000590609 569 ntBASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 BNIP3P29-201ENST00000598302 571 ntBASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 TMEM261P1-201ENST00000604899 340 ntBASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 AC011447.5-201ENST00000616168 564 ntBASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 AC005702.4-201ENST00000618393 416 ntBASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.32■□□□□ 0.04
FOXR1Q6PIV2 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FOXR1Q6PIV2 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
FOXR1Q6PIV2 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.31■□□□□ 0.04
FOXR1Q6PIV2 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXR1Q6PIV2 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXR1Q6PIV2 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FOXR1Q6PIV2 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXR1Q6PIV2 AL354702.1-201ENST00000442006 1960 ntBASIC15.31■□□□□ 0.04
FOXR1Q6PIV2 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXR1Q6PIV2 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXR1Q6PIV2 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXR1Q6PIV2 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
FOXR1Q6PIV2 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXR1Q6PIV2 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXR1Q6PIV2 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
FOXR1Q6PIV2 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.31■□□□□ 0.04
FOXR1Q6PIV2 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.31■□□□□ 0.04
FOXR1Q6PIV2 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
FOXR1Q6PIV2 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
FOXR1Q6PIV2 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.31■□□□□ 0.04
FOXR1Q6PIV2 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC15.31■□□□□ 0.04
FOXR1Q6PIV2 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXR1Q6PIV2 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXR1Q6PIV2 AL691432.1-201ENST00000596308 1422 ntBASIC15.31■□□□□ 0.04
FOXR1Q6PIV2 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
FOXR1Q6PIV2 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXR1Q6PIV2 CYP4F24P-201ENST00000586049 1580 ntBASIC15.31■□□□□ 0.04
FOXR1Q6PIV2 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.31■□□□□ 0.04
FOXR1Q6PIV2 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
FOXR1Q6PIV2 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
FOXR1Q6PIV2 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXR1Q6PIV2 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.31■□□□□ 0.04
FOXR1Q6PIV2 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC15.31■□□□□ 0.04
FOXR1Q6PIV2 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC15.31■□□□□ 0.04
FOXR1Q6PIV2 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXR1Q6PIV2 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 MIR600HG-201ENST00000449175 5984 ntBASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 AC245100.3-201ENST00000441281 285 ntBASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 AC119751.2-201ENST00000504529 210 ntBASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 AC022447.6-201ENST00000515522 438 ntBASIC15.3■□□□□ 0.04
FOXR1Q6PIV2 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms