Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
CTR9Q6PD62 AC005089.1-201ENST00000619486 2241 ntBASIC17.3■□□□□ 0.36
CTR9Q6PD62 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC17.3■□□□□ 0.36
CTR9Q6PD62 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC17.3■□□□□ 0.36
CTR9Q6PD62 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
CTR9Q6PD62 USP31-203ENST00000567975 2142 ntTSL 2 BASIC17.3■□□□□ 0.36
CTR9Q6PD62 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTR9Q6PD62 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
CTR9Q6PD62 AP001267.2-201ENST00000532619 2086 ntBASIC17.3■□□□□ 0.36
CTR9Q6PD62 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC17.3■□□□□ 0.36
CTR9Q6PD62 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTR9Q6PD62 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CTR9Q6PD62 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTR9Q6PD62 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTR9Q6PD62 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC17.3■□□□□ 0.36
CTR9Q6PD62 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CTR9Q6PD62 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTR9Q6PD62 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CTR9Q6PD62 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTR9Q6PD62 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CTR9Q6PD62 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTR9Q6PD62 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTR9Q6PD62 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTR9Q6PD62 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.29■□□□□ 0.36
CTR9Q6PD62 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTR9Q6PD62 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTR9Q6PD62 SBF1P1-201ENST00000444527 5631 ntBASIC17.29■□□□□ 0.36
CTR9Q6PD62 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTR9Q6PD62 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTR9Q6PD62 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTR9Q6PD62 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTR9Q6PD62 AC140479.7-201ENST00000636301 2332 ntBASIC17.29■□□□□ 0.36
CTR9Q6PD62 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTR9Q6PD62 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTR9Q6PD62 ISCA2P1-201ENST00000425548 448 ntBASIC17.29■□□□□ 0.36
CTR9Q6PD62 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.29■□□□□ 0.36
CTR9Q6PD62 AC012618.1-201ENST00000461223 412 ntBASIC17.29■□□□□ 0.36
CTR9Q6PD62 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTR9Q6PD62 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.29■□□□□ 0.36
CTR9Q6PD62 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.29■□□□□ 0.36
CTR9Q6PD62 PGAM1P5-201ENST00000548011 764 ntBASIC17.29■□□□□ 0.36
CTR9Q6PD62 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC17.29■□□□□ 0.36
CTR9Q6PD62 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC17.29■□□□□ 0.36
CTR9Q6PD62 RN7SL574P-201ENST00000581512 297 ntBASIC17.29■□□□□ 0.36
CTR9Q6PD62 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.29■□□□□ 0.36
CTR9Q6PD62 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
CTR9Q6PD62 AF254983.2-201ENST00000612331 135 ntBASIC17.29■□□□□ 0.36
CTR9Q6PD62 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTR9Q6PD62 NAP1L6-202ENST00000641404 1222 ntBASIC17.29■□□□□ 0.36
CTR9Q6PD62 AL390755.1-201ENST00000623716 2027 ntBASIC17.29■□□□□ 0.36
CTR9Q6PD62 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTR9Q6PD62 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTR9Q6PD62 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CTR9Q6PD62 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTR9Q6PD62 KRT8P21-201ENST00000430398 1491 ntBASIC17.29■□□□□ 0.36
CTR9Q6PD62 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.29■□□□□ 0.36
CTR9Q6PD62 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.29■□□□□ 0.36
CTR9Q6PD62 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTR9Q6PD62 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTR9Q6PD62 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC17.29■□□□□ 0.36
CTR9Q6PD62 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTR9Q6PD62 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CTR9Q6PD62 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTR9Q6PD62 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTR9Q6PD62 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC17.29■□□□□ 0.36
CTR9Q6PD62 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTR9Q6PD62 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.28■□□□□ 0.36
CTR9Q6PD62 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTR9Q6PD62 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.28■□□□□ 0.36
CTR9Q6PD62 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC17.28■□□□□ 0.36
CTR9Q6PD62 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTR9Q6PD62 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTR9Q6PD62 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTR9Q6PD62 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.28■□□□□ 0.36
CTR9Q6PD62 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CTR9Q6PD62 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CTR9Q6PD62 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC17.28■□□□□ 0.36
CTR9Q6PD62 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTR9Q6PD62 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTR9Q6PD62 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTR9Q6PD62 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC17.28■□□□□ 0.36
CTR9Q6PD62 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CTR9Q6PD62 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTR9Q6PD62 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.28■□□□□ 0.36
CTR9Q6PD62 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.28■□□□□ 0.36
CTR9Q6PD62 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.28■□□□□ 0.36
CTR9Q6PD62 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC17.28■□□□□ 0.36
CTR9Q6PD62 Z97180.1-201ENST00000445173 988 ntBASIC17.28■□□□□ 0.36
CTR9Q6PD62 TPT1P11-201ENST00000458482 498 ntBASIC17.28■□□□□ 0.36
CTR9Q6PD62 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC17.28■□□□□ 0.36
CTR9Q6PD62 AL161670.2-201ENST00000557650 1227 ntBASIC17.28■□□□□ 0.36
CTR9Q6PD62 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CTR9Q6PD62 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTR9Q6PD62 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTR9Q6PD62 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTR9Q6PD62 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTR9Q6PD62 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTR9Q6PD62 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTR9Q6PD62 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTR9Q6PD62 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms