Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H3F3CQ6NXT2 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 AC007191.1-201ENST00000623179 2995 ntBASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 AC239868.1-201ENST00000369385 493 ntBASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 KRT18P36-201ENST00000411618 1276 ntBASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 ISCA2P1-201ENST00000425548 448 ntBASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 NUP210P1-202ENST00000504322 710 ntBASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 AF254983.2-201ENST00000612331 135 ntBASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
H3F3CQ6NXT2 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.49□□□□□ -0.25
H3F3CQ6NXT2 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.49□□□□□ -0.25
H3F3CQ6NXT2 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H3F3CQ6NXT2 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
H3F3CQ6NXT2 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H3F3CQ6NXT2 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
H3F3CQ6NXT2 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.49□□□□□ -0.25
H3F3CQ6NXT2 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
H3F3CQ6NXT2 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H3F3CQ6NXT2 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
H3F3CQ6NXT2 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
H3F3CQ6NXT2 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
H3F3CQ6NXT2 KRT8P21-201ENST00000430398 1491 ntBASIC13.49□□□□□ -0.25
H3F3CQ6NXT2 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
H3F3CQ6NXT2 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H3F3CQ6NXT2 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
H3F3CQ6NXT2 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.49□□□□□ -0.25
H3F3CQ6NXT2 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
H3F3CQ6NXT2 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
H3F3CQ6NXT2 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.49□□□□□ -0.25
H3F3CQ6NXT2 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
H3F3CQ6NXT2 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.49□□□□□ -0.25
H3F3CQ6NXT2 AJ011931.1-201ENST00000618749 2492 ntBASIC13.49□□□□□ -0.25
H3F3CQ6NXT2 AC087386.2-201ENST00000623212 4637 ntBASIC13.49□□□□□ -0.25
H3F3CQ6NXT2 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
H3F3CQ6NXT2 AHCYP4-201ENST00000419201 1315 ntBASIC13.49□□□□□ -0.25
H3F3CQ6NXT2 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H3F3CQ6NXT2 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H3F3CQ6NXT2 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.49□□□□□ -0.25
H3F3CQ6NXT2 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.49□□□□□ -0.25
H3F3CQ6NXT2 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
H3F3CQ6NXT2 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms