Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC19.96■□□□□ 0.79
CDCA8Q53HL2 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDCA8Q53HL2 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
CDCA8Q53HL2 FAM90A2P-201ENST00000511144 1395 ntBASIC19.95■□□□□ 0.79
CDCA8Q53HL2 FAM90A25P-201ENST00000528404 1395 ntBASIC19.95■□□□□ 0.79
CDCA8Q53HL2 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 BANF1P3-201ENST00000412556 261 ntBASIC19.95■□□□□ 0.78
CDCA8Q53HL2 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 AC116345.2-201ENST00000512837 523 ntBASIC19.95■□□□□ 0.78
CDCA8Q53HL2 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 KRT8P1-201ENST00000557533 1207 ntBASIC19.95■□□□□ 0.78
CDCA8Q53HL2 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 FGFR3P5-201ENST00000564496 886 ntBASIC19.95■□□□□ 0.78
CDCA8Q53HL2 AC026803.1-201ENST00000569130 274 ntBASIC19.95■□□□□ 0.78
CDCA8Q53HL2 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 LINC02228-204ENST00000642115 2962 ntBASIC19.95■□□□□ 0.78
CDCA8Q53HL2 BX640514.1-201ENST00000583223 1918 ntBASIC19.95■□□□□ 0.78
CDCA8Q53HL2 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA8Q53HL2 AC097359.2-201ENST00000604992 2389 ntBASIC19.94■□□□□ 0.78
CDCA8Q53HL2 AC103702.1-201ENST00000548801 2630 ntBASIC19.94■□□□□ 0.78
CDCA8Q53HL2 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDCA8Q53HL2 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDCA8Q53HL2 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDCA8Q53HL2 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
CDCA8Q53HL2 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDCA8Q53HL2 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CDCA8Q53HL2 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDCA8Q53HL2 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CDCA8Q53HL2 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDCA8Q53HL2 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC19.94■□□□□ 0.78
CDCA8Q53HL2 AC026320.2-201ENST00000434379 478 ntBASIC19.94■□□□□ 0.78
CDCA8Q53HL2 RN7SL277P-201ENST00000481521 288 ntBASIC19.94■□□□□ 0.78
CDCA8Q53HL2 IMP3P2-201ENST00000489760 475 ntBASIC19.94■□□□□ 0.78
CDCA8Q53HL2 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC19.94■□□□□ 0.78
CDCA8Q53HL2 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC19.94■□□□□ 0.78
CDCA8Q53HL2 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
CDCA8Q53HL2 NAT9-220ENST00000582870 896 ntTSL 5 BASIC19.94■□□□□ 0.78
CDCA8Q53HL2 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC19.94■□□□□ 0.78
CDCA8Q53HL2 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDCA8Q53HL2 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC19.94■□□□□ 0.78
CDCA8Q53HL2 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDCA8Q53HL2 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC19.94■□□□□ 0.78
CDCA8Q53HL2 AC099063.4-201ENST00000641099 1602 ntBASIC19.94■□□□□ 0.78
CDCA8Q53HL2 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC19.94■□□□□ 0.78
CDCA8Q53HL2 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDCA8Q53HL2 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDCA8Q53HL2 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC19.94■□□□□ 0.78
CDCA8Q53HL2 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CDCA8Q53HL2 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 KRT8P19-201ENST00000551916 1455 ntBASIC19.93■□□□□ 0.78
CDCA8Q53HL2 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 AL512310.5-201ENST00000551999 515 ntBASIC19.93■□□□□ 0.78
CDCA8Q53HL2 AC105129.2-201ENST00000559536 390 ntBASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms