Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM71Q2Q1W2 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC15.73■□□□□ 0.11
TRIM71Q2Q1W2 RGS5-216ENST00000449680 788 ntTSL 3 BASIC15.73■□□□□ 0.11
TRIM71Q2Q1W2 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM71Q2Q1W2 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC15.73■□□□□ 0.11
TRIM71Q2Q1W2 RN7SL396P-201ENST00000471086 295 ntBASIC15.73■□□□□ 0.11
TRIM71Q2Q1W2 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC15.73■□□□□ 0.11
TRIM71Q2Q1W2 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM71Q2Q1W2 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM71Q2Q1W2 NAA40-205ENST00000539656 577 ntTSL 4 BASIC15.73■□□□□ 0.11
TRIM71Q2Q1W2 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC15.73■□□□□ 0.11
TRIM71Q2Q1W2 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.73■□□□□ 0.11
TRIM71Q2Q1W2 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC15.73■□□□□ 0.11
TRIM71Q2Q1W2 AC002044.2-201ENST00000624910 970 ntBASIC15.73■□□□□ 0.11
TRIM71Q2Q1W2 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM71Q2Q1W2 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM71Q2Q1W2 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM71Q2Q1W2 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM71Q2Q1W2 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM71Q2Q1W2 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM71Q2Q1W2 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM71Q2Q1W2 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM71Q2Q1W2 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM71Q2Q1W2 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM71Q2Q1W2 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM71Q2Q1W2 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM71Q2Q1W2 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM71Q2Q1W2 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM71Q2Q1W2 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM71Q2Q1W2 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM71Q2Q1W2 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM71Q2Q1W2 AL354702.1-201ENST00000442006 1960 ntBASIC15.73■□□□□ 0.11
TRIM71Q2Q1W2 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM71Q2Q1W2 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.73■□□□□ 0.11
TRIM71Q2Q1W2 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM71Q2Q1W2 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 AL591122.2-201ENST00000624125 1853 ntBASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 MIR1227-201ENST00000408484 88 ntBASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 STK16-203ENST00000409516 895 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 BCAS2P2-201ENST00000425064 674 ntBASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 RPL35P9-201ENST00000446059 350 ntBASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 AC104506.1-201ENST00000609247 429 ntBASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 AL365209.1-201ENST00000624418 6473 ntBASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 AJ011931.1-201ENST00000618749 2492 ntBASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM71Q2Q1W2 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM71Q2Q1W2 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM71Q2Q1W2 MYADML-201ENST00000474610 2147 ntBASIC15.71■□□□□ 0.11
TRIM71Q2Q1W2 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TRIM71Q2Q1W2 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TRIM71Q2Q1W2 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM71Q2Q1W2 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM71Q2Q1W2 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
TRIM71Q2Q1W2 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM71Q2Q1W2 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TRIM71Q2Q1W2 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TRIM71Q2Q1W2 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM71Q2Q1W2 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM71Q2Q1W2 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms