Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 AL137244.1-201ENST00000422931 865 ntBASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 IFNWP2-201ENST00000431203 580 ntBASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 GCOM2-201ENST00000509133 1104 ntBASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 KRT18P37-201ENST00000520711 1282 ntBASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 AC078814.4-201ENST00000546650 327 ntBASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 EEF1DP7-201ENST00000580496 513 ntBASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 AC139713.2-207ENST00000641556 1292 ntBASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO4Q2I0M5 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 AC136604.1-202ENST00000425471 771 ntBASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 PFN2-212ENST00000490975 858 ntTSL 4 BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 RN7SL375P-201ENST00000492442 298 ntBASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 IGHV1-12-201ENST00000518307 205 ntBASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 AC124068.2-201ENST00000569473 1109 ntBASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 MIR4640-201ENST00000581824 90 ntBASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RSPO4Q2I0M5 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
RSPO4Q2I0M5 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
RSPO4Q2I0M5 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
RSPO4Q2I0M5 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.96□□□□□ -0.18
RSPO4Q2I0M5 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
RSPO4Q2I0M5 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
RSPO4Q2I0M5 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
RSPO4Q2I0M5 AC009090.5-201ENST00000624886 2285 ntBASIC13.95□□□□□ -0.18
RSPO4Q2I0M5 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms