Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.9□□□□□ -0.18
CHRNB3Q05901 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.9□□□□□ -0.18
CHRNB3Q05901 NUS1P3-201ENST00000423502 862 ntBASIC13.9□□□□□ -0.18
CHRNB3Q05901 UGT1A2P-201ENST00000454886 866 ntBASIC13.9□□□□□ -0.18
CHRNB3Q05901 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.9□□□□□ -0.18
CHRNB3Q05901 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.9□□□□□ -0.18
CHRNB3Q05901 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.9□□□□□ -0.18
CHRNB3Q05901 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.9□□□□□ -0.18
CHRNB3Q05901 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.9□□□□□ -0.18
CHRNB3Q05901 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.9□□□□□ -0.18
CHRNB3Q05901 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CHRNB3Q05901 TEX28P1-201ENST00000613479 1221 ntBASIC13.9□□□□□ -0.18
CHRNB3Q05901 TEX28P2-201ENST00000617764 1221 ntBASIC13.9□□□□□ -0.18
CHRNB3Q05901 AL358472.5-202ENST00000641448 1267 ntBASIC13.9□□□□□ -0.18
CHRNB3Q05901 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHRNB3Q05901 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CHRNB3Q05901 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.9□□□□□ -0.18
CHRNB3Q05901 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.9□□□□□ -0.18
CHRNB3Q05901 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
CHRNB3Q05901 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CHRNB3Q05901 SALL4P5-201ENST00000419001 1760 ntBASIC13.9□□□□□ -0.18
CHRNB3Q05901 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CHRNB3Q05901 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHRNB3Q05901 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHRNB3Q05901 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.9□□□□□ -0.18
CHRNB3Q05901 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHRNB3Q05901 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CHRNB3Q05901 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHRNB3Q05901 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CHRNB3Q05901 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHRNB3Q05901 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHRNB3Q05901 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CHRNB3Q05901 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CHRNB3Q05901 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.9□□□□□ -0.18
CHRNB3Q05901 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHRNB3Q05901 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.9□□□□□ -0.18
CHRNB3Q05901 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CHRNB3Q05901 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
CHRNB3Q05901 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CHRNB3Q05901 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.19
CHRNB3Q05901 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.9□□□□□ -0.19
CHRNB3Q05901 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.9□□□□□ -0.19
CHRNB3Q05901 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRNB3Q05901 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.89□□□□□ -0.19
CHRNB3Q05901 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRNB3Q05901 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRNB3Q05901 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.89□□□□□ -0.19
CHRNB3Q05901 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRNB3Q05901 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.89□□□□□ -0.19
CHRNB3Q05901 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRNB3Q05901 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.89□□□□□ -0.19
CHRNB3Q05901 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRNB3Q05901 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.89□□□□□ -0.19
CHRNB3Q05901 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.89□□□□□ -0.19
CHRNB3Q05901 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRNB3Q05901 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRNB3Q05901 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRNB3Q05901 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CHRNB3Q05901 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHRNB3Q05901 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
CHRNB3Q05901 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRNB3Q05901 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRNB3Q05901 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHRNB3Q05901 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CHRNB3Q05901 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CHRNB3Q05901 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRNB3Q05901 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHRNB3Q05901 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.89□□□□□ -0.19
CHRNB3Q05901 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRNB3Q05901 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.89□□□□□ -0.19
CHRNB3Q05901 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.89□□□□□ -0.19
CHRNB3Q05901 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHRNB3Q05901 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRNB3Q05901 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRNB3Q05901 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.89□□□□□ -0.19
CHRNB3Q05901 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRNB3Q05901 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.89□□□□□ -0.19
CHRNB3Q05901 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.89□□□□□ -0.19
CHRNB3Q05901 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.89□□□□□ -0.19
CHRNB3Q05901 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRNB3Q05901 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRNB3Q05901 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRNB3Q05901 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CHRNB3Q05901 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.89□□□□□ -0.19
CHRNB3Q05901 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.89□□□□□ -0.19
CHRNB3Q05901 NUTM2HP-201ENST00000442076 2498 ntBASIC13.89□□□□□ -0.19
CHRNB3Q05901 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.89□□□□□ -0.19
CHRNB3Q05901 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.89□□□□□ -0.19
CHRNB3Q05901 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CHRNB3Q05901 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRNB3Q05901 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHRNB3Q05901 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHRNB3Q05901 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.89□□□□□ -0.19
CHRNB3Q05901 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.89□□□□□ -0.19
CHRNB3Q05901 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRNB3Q05901 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHRNB3Q05901 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRNB3Q05901 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.89□□□□□ -0.19
CHRNB3Q05901 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRNB3Q05901 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms