Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCS1Q01581 TMEM14DP-201ENST00000422205 345 ntBASIC14.1□□□□□ -0.15
HMGCS1Q01581 FAM197Y7-201ENST00000432892 766 ntBASIC14.1□□□□□ -0.15
HMGCS1Q01581 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.1□□□□□ -0.15
HMGCS1Q01581 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.1□□□□□ -0.15
HMGCS1Q01581 RNA5SP486-201ENST00000515961 83 ntBASIC14.1□□□□□ -0.15
HMGCS1Q01581 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.1□□□□□ -0.15
HMGCS1Q01581 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.1□□□□□ -0.15
HMGCS1Q01581 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.1□□□□□ -0.15
HMGCS1Q01581 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.1□□□□□ -0.15
HMGCS1Q01581 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HMGCS1Q01581 CR383656.12-201ENST00000549567 513 ntBASIC14.1□□□□□ -0.15
HMGCS1Q01581 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.1□□□□□ -0.15
HMGCS1Q01581 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
HMGCS1Q01581 MIR4683-201ENST00000579659 81 ntBASIC14.1□□□□□ -0.15
HMGCS1Q01581 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.1□□□□□ -0.15
HMGCS1Q01581 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCS1Q01581 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCS1Q01581 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCS1Q01581 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.1□□□□□ -0.15
HMGCS1Q01581 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.1□□□□□ -0.15
HMGCS1Q01581 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCS1Q01581 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
HMGCS1Q01581 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCS1Q01581 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCS1Q01581 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCS1Q01581 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
HMGCS1Q01581 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCS1Q01581 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HMGCS1Q01581 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCS1Q01581 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCS1Q01581 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCS1Q01581 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCS1Q01581 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
HMGCS1Q01581 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCS1Q01581 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCS1Q01581 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCS1Q01581 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
HMGCS1Q01581 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCS1Q01581 KRT8P28-201ENST00000433288 1390 ntBASIC14.09□□□□□ -0.15
HMGCS1Q01581 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
HMGCS1Q01581 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCS1Q01581 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.09□□□□□ -0.15
HMGCS1Q01581 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.09□□□□□ -0.15
HMGCS1Q01581 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCS1Q01581 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCS1Q01581 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCS1Q01581 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCS1Q01581 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.09□□□□□ -0.15
HMGCS1Q01581 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCS1Q01581 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
HMGCS1Q01581 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCS1Q01581 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCS1Q01581 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.09□□□□□ -0.15
HMGCS1Q01581 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
HMGCS1Q01581 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCS1Q01581 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.09□□□□□ -0.15
HMGCS1Q01581 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.09□□□□□ -0.15
HMGCS1Q01581 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCS1Q01581 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCS1Q01581 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCS1Q01581 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
HMGCS1Q01581 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCS1Q01581 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.09□□□□□ -0.15
HMGCS1Q01581 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.09□□□□□ -0.15
HMGCS1Q01581 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCS1Q01581 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCS1Q01581 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCS1Q01581 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.09□□□□□ -0.15
HMGCS1Q01581 AL512384.1-201ENST00000406683 331 ntBASIC14.09□□□□□ -0.15
HMGCS1Q01581 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.09□□□□□ -0.15
HMGCS1Q01581 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.09□□□□□ -0.15
HMGCS1Q01581 C2orf27AP3-201ENST00000434123 579 ntBASIC14.09□□□□□ -0.15
HMGCS1Q01581 FAM8A4P-201ENST00000435433 1213 ntBASIC14.09□□□□□ -0.15
HMGCS1Q01581 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCS1Q01581 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.09□□□□□ -0.15
HMGCS1Q01581 FTH1P14-201ENST00000482930 551 ntBASIC14.09□□□□□ -0.15
HMGCS1Q01581 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCS1Q01581 USP32P1-208ENST00000506594 1164 ntBASIC14.09□□□□□ -0.15
HMGCS1Q01581 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.09□□□□□ -0.15
HMGCS1Q01581 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
HMGCS1Q01581 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.09□□□□□ -0.15
HMGCS1Q01581 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCS1Q01581 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.09□□□□□ -0.15
HMGCS1Q01581 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.09□□□□□ -0.15
HMGCS1Q01581 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.09□□□□□ -0.15
HMGCS1Q01581 AC244669.2-201ENST00000612320 853 ntBASIC14.09□□□□□ -0.15
HMGCS1Q01581 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
HMGCS1Q01581 AL354718.3-201ENST00000616414 581 ntBASIC14.09□□□□□ -0.15
HMGCS1Q01581 CR382287.1-201ENST00000623954 586 ntBASIC14.09□□□□□ -0.15
HMGCS1Q01581 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.09□□□□□ -0.15
HMGCS1Q01581 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.09□□□□□ -0.15
HMGCS1Q01581 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.09□□□□□ -0.15
HMGCS1Q01581 AC002472.3-201ENST00000640124 621 ntBASIC14.09□□□□□ -0.15
HMGCS1Q01581 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HMGCS1Q01581 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.09□□□□□ -0.15
HMGCS1Q01581 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCS1Q01581 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCS1Q01581 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCS1Q01581 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms