Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
HSPG2P98160 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC8.63□□□□□ -1.03
HSPG2P98160 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC8.63□□□□□ -1.03
HSPG2P98160 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
HSPG2P98160 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
HSPG2P98160 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC8.63□□□□□ -1.03
HSPG2P98160 AC011997.1-201ENST00000409845 1032 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
HSPG2P98160 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
HSPG2P98160 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
HSPG2P98160 LINC01508-201ENST00000425666 1013 ntTSL 3 BASIC8.63□□□□□ -1.03
HSPG2P98160 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC8.63□□□□□ -1.03
HSPG2P98160 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
HSPG2P98160 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC8.63□□□□□ -1.03
HSPG2P98160 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
HSPG2P98160 PHBP18-201ENST00000546648 813 ntBASIC8.63□□□□□ -1.03
HSPG2P98160 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC8.63□□□□□ -1.03
HSPG2P98160 AC022167.5-201ENST00000636296 1250 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
HSPG2P98160 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
HSPG2P98160 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
HSPG2P98160 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
HSPG2P98160 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC8.62□□□□□ -1.03
HSPG2P98160 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
HSPG2P98160 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC8.62□□□□□ -1.03
HSPG2P98160 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
HSPG2P98160 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
HSPG2P98160 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC8.62□□□□□ -1.03
HSPG2P98160 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC8.62□□□□□ -1.03
HSPG2P98160 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC8.62□□□□□ -1.03
HSPG2P98160 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HSPG2P98160 CHCHD2P6-201ENST00000454346 447 ntBASIC8.62□□□□□ -1.03
HSPG2P98160 AL161727.1-201ENST00000457409 530 ntBASIC8.62□□□□□ -1.03
HSPG2P98160 HAX1-204ENST00000457918 914 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HSPG2P98160 PARVG-208ENST00000466375 820 ntTSL 2 BASIC8.62□□□□□ -1.03
HSPG2P98160 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC8.62□□□□□ -1.03
HSPG2P98160 FAM153C-208ENST00000511189 926 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
HSPG2P98160 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC8.62□□□□□ -1.03
HSPG2P98160 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC8.62□□□□□ -1.03
HSPG2P98160 ALOX12P1-201ENST00000579299 1229 ntBASIC8.62□□□□□ -1.03
HSPG2P98160 HNRNPA1P11-201ENST00000580106 956 ntBASIC8.62□□□□□ -1.03
HSPG2P98160 AL078624.1-201ENST00000604004 547 ntBASIC8.62□□□□□ -1.03
HSPG2P98160 AC010335.3-201ENST00000623767 531 ntBASIC8.62□□□□□ -1.03
HSPG2P98160 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC8.62□□□□□ -1.03
HSPG2P98160 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HSPG2P98160 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HSPG2P98160 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
HSPG2P98160 AC015688.4-201ENST00000580780 1647 ntBASIC8.62□□□□□ -1.03
HSPG2P98160 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HSPG2P98160 DLX4-206ENST00000611342 1662 ntBASIC8.62□□□□□ -1.03
HSPG2P98160 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
HSPG2P98160 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC8.62□□□□□ -1.03
HSPG2P98160 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HSPG2P98160 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HSPG2P98160 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HSPG2P98160 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HSPG2P98160 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC8.62□□□□□ -1.03
HSPG2P98160 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HSPG2P98160 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC8.62□□□□□ -1.03
HSPG2P98160 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HSPG2P98160 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
HSPG2P98160 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HSPG2P98160 IGFL4-201ENST00000377697 573 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
HSPG2P98160 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HSPG2P98160 LINC00685-201ENST00000391707 428 ntTSL 5 BASIC8.62□□□□□ -1.03
HSPG2P98160 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
HSPG2P98160 FTLP3-201ENST00000427242 528 ntBASIC8.62□□□□□ -1.03
HSPG2P98160 PLAC9P1-203ENST00000440031 223 ntBASIC8.62□□□□□ -1.03
HSPG2P98160 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC8.62□□□□□ -1.03
HSPG2P98160 SFPQP1-201ENST00000446621 1786 ntBASIC8.62□□□□□ -1.03
HSPG2P98160 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HSPG2P98160 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC8.62□□□□□ -1.03
HSPG2P98160 NAA60-236ENST00000577013 575 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HSPG2P98160 MIR5091-201ENST00000578707 93 ntBASIC8.62□□□□□ -1.03
HSPG2P98160 AC132825.4-202ENST00000578792 434 ntBASIC8.62□□□□□ -1.03
HSPG2P98160 MIR4326-201ENST00000582203 59 ntBASIC8.62□□□□□ -1.03
HSPG2P98160 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HSPG2P98160 AC009779.7-201ENST00000609031 469 ntBASIC8.62□□□□□ -1.03
HSPG2P98160 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC8.62□□□□□ -1.03
HSPG2P98160 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC8.62□□□□□ -1.03
HSPG2P98160 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HSPG2P98160 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HSPG2P98160 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC8.62□□□□□ -1.03
HSPG2P98160 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HSPG2P98160 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HSPG2P98160 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
HSPG2P98160 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC8.62□□□□□ -1.03
HSPG2P98160 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HSPG2P98160 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HSPG2P98160 ACTG1P23-201ENST00000437653 1074 ntBASIC8.62□□□□□ -1.03
HSPG2P98160 AC092865.2-201ENST00000439409 971 ntBASIC8.62□□□□□ -1.03
HSPG2P98160 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HSPG2P98160 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC8.62□□□□□ -1.03
HSPG2P98160 AC138035.2-201ENST00000509192 727 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HSPG2P98160 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
HSPG2P98160 LINC02193-207ENST00000621799 723 ntTSL 5 BASIC8.62□□□□□ -1.03
HSPG2P98160 AC069287.1-202ENST00000622626 723 ntTSL 5 BASIC8.62□□□□□ -1.03
HSPG2P98160 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC8.62□□□□□ -1.03
HSPG2P98160 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HSPG2P98160 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC8.62□□□□□ -1.03
HSPG2P98160 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HSPG2P98160 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms