Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
UBA52P62987 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.72□□□□□ -0.37
UBA52P62987 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBA52P62987 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC12.72□□□□□ -0.37
UBA52P62987 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UBA52P62987 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBA52P62987 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
UBA52P62987 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.72□□□□□ -0.37
UBA52P62987 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.72□□□□□ -0.37
UBA52P62987 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UBA52P62987 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.72□□□□□ -0.37
UBA52P62987 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.72□□□□□ -0.37
UBA52P62987 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.72□□□□□ -0.37
UBA52P62987 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
UBA52P62987 TDH-203ENST00000531764 1110 ntBASIC12.72□□□□□ -0.37
UBA52P62987 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.72□□□□□ -0.37
UBA52P62987 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.72□□□□□ -0.37
UBA52P62987 MIR5189-201ENST00000577370 114 ntBASIC12.72□□□□□ -0.37
UBA52P62987 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.72□□□□□ -0.37
UBA52P62987 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC12.72□□□□□ -0.37
UBA52P62987 AL391069.4-201ENST00000609583 481 ntBASIC12.72□□□□□ -0.37
UBA52P62987 AL022328.1-201ENST00000610050 478 ntBASIC12.72□□□□□ -0.37
UBA52P62987 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.72□□□□□ -0.37
UBA52P62987 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.72□□□□□ -0.37
UBA52P62987 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
UBA52P62987 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UBA52P62987 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
UBA52P62987 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
UBA52P62987 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
UBA52P62987 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBA52P62987 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBA52P62987 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBA52P62987 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UBA52P62987 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBA52P62987 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBA52P62987 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBA52P62987 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
UBA52P62987 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
UBA52P62987 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
UBA52P62987 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
UBA52P62987 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UBA52P62987 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC12.72□□□□□ -0.37
UBA52P62987 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBA52P62987 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBA52P62987 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBA52P62987 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBA52P62987 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBA52P62987 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.71□□□□□ -0.37
UBA52P62987 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBA52P62987 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.71□□□□□ -0.37
UBA52P62987 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBA52P62987 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBA52P62987 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.71□□□□□ -0.37
UBA52P62987 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBA52P62987 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.71□□□□□ -0.37
UBA52P62987 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBA52P62987 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
UBA52P62987 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBA52P62987 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
UBA52P62987 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.37
UBA52P62987 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
UBA52P62987 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBA52P62987 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBA52P62987 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.71□□□□□ -0.37
UBA52P62987 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.71□□□□□ -0.37
UBA52P62987 AC004987.2-201ENST00000395959 1148 ntBASIC12.71□□□□□ -0.37
UBA52P62987 NME6-203ENST00000415644 849 ntTSL 2 BASIC12.71□□□□□ -0.37
UBA52P62987 ACTG1P3-201ENST00000431775 1114 ntBASIC12.71□□□□□ -0.37
UBA52P62987 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.71□□□□□ -0.37
UBA52P62987 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
UBA52P62987 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.71□□□□□ -0.37
UBA52P62987 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.71□□□□□ -0.37
UBA52P62987 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.71□□□□□ -0.37
UBA52P62987 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.71□□□□□ -0.37
UBA52P62987 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.71□□□□□ -0.37
UBA52P62987 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC12.71□□□□□ -0.37
UBA52P62987 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.71□□□□□ -0.37
UBA52P62987 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.71□□□□□ -0.37
UBA52P62987 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.71□□□□□ -0.37
UBA52P62987 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBA52P62987 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBA52P62987 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
UBA52P62987 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.71□□□□□ -0.37
UBA52P62987 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
UBA52P62987 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
UBA52P62987 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
UBA52P62987 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
UBA52P62987 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
UBA52P62987 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
UBA52P62987 AC018442.1-201ENST00000421439 2061 ntBASIC12.71□□□□□ -0.38
UBA52P62987 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.71□□□□□ -0.38
UBA52P62987 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
UBA52P62987 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
UBA52P62987 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.71□□□□□ -0.38
UBA52P62987 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
UBA52P62987 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
UBA52P62987 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
UBA52P62987 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.71□□□□□ -0.38
UBA52P62987 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.71□□□□□ -0.38
UBA52P62987 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms