Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.81□□□□□ -0.2
RPS3AP61247 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.81□□□□□ -0.2
RPS3AP61247 SLC25A47P1-201ENST00000531577 414 ntBASIC13.81□□□□□ -0.2
RPS3AP61247 RAB43P1-201ENST00000561790 589 ntBASIC13.81□□□□□ -0.2
RPS3AP61247 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.81□□□□□ -0.2
RPS3AP61247 CLUHP6-201ENST00000580789 941 ntBASIC13.81□□□□□ -0.2
RPS3AP61247 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.81□□□□□ -0.2
RPS3AP61247 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.81□□□□□ -0.2
RPS3AP61247 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.81□□□□□ -0.2
RPS3AP61247 AC005252.2-201ENST00000624630 1141 ntBASIC13.81□□□□□ -0.2
RPS3AP61247 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.81□□□□□ -0.2
RPS3AP61247 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPS3AP61247 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RPS3AP61247 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
RPS3AP61247 AC134312.5-201ENST00000568031 1313 ntBASIC13.81□□□□□ -0.2
RPS3AP61247 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.81□□□□□ -0.2
RPS3AP61247 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
RPS3AP61247 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
RPS3AP61247 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RPS3AP61247 AC018442.1-201ENST00000421439 2061 ntBASIC13.81□□□□□ -0.2
RPS3AP61247 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.81□□□□□ -0.2
RPS3AP61247 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPS3AP61247 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPS3AP61247 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
RPS3AP61247 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.8□□□□□ -0.2
RPS3AP61247 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
RPS3AP61247 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.8□□□□□ -0.2
RPS3AP61247 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RPS3AP61247 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.8□□□□□ -0.2
RPS3AP61247 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPS3AP61247 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RPS3AP61247 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPS3AP61247 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPS3AP61247 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RPS3AP61247 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RPS3AP61247 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPS3AP61247 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.8□□□□□ -0.2
RPS3AP61247 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RPS3AP61247 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPS3AP61247 AC004241.5-201ENST00000623870 2448 ntBASIC13.8□□□□□ -0.2
RPS3AP61247 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.8□□□□□ -0.2
RPS3AP61247 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.8□□□□□ -0.2
RPS3AP61247 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RPS3AP61247 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPS3AP61247 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RPS3AP61247 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPS3AP61247 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.8□□□□□ -0.2
RPS3AP61247 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.8□□□□□ -0.2
RPS3AP61247 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
RPS3AP61247 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPS3AP61247 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPS3AP61247 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.8□□□□□ -0.2
RPS3AP61247 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.8□□□□□ -0.2
RPS3AP61247 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.8□□□□□ -0.2
RPS3AP61247 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
RPS3AP61247 AC012441.1-201ENST00000446669 685 ntBASIC13.8□□□□□ -0.2
RPS3AP61247 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
RPS3AP61247 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RPS3AP61247 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.8□□□□□ -0.2
RPS3AP61247 KRT17P8-201ENST00000540749 863 ntBASIC13.8□□□□□ -0.2
RPS3AP61247 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.8□□□□□ -0.2
RPS3AP61247 SAMD11P1-201ENST00000571429 661 ntBASIC13.8□□□□□ -0.2
RPS3AP61247 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.8□□□□□ -0.2
RPS3AP61247 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
RPS3AP61247 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.8□□□□□ -0.2
RPS3AP61247 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.8□□□□□ -0.2
RPS3AP61247 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPS3AP61247 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
RPS3AP61247 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RPS3AP61247 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPS3AP61247 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPS3AP61247 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPS3AP61247 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPS3AP61247 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.8□□□□□ -0.2
RPS3AP61247 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPS3AP61247 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPS3AP61247 AC114271.1-201ENST00000612689 2813 ntBASIC13.8□□□□□ -0.2
RPS3AP61247 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPS3AP61247 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPS3AP61247 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPS3AP61247 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPS3AP61247 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RPS3AP61247 AC020658.7-201ENST00000624274 2442 ntBASIC13.8□□□□□ -0.2
RPS3AP61247 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.8□□□□□ -0.2
RPS3AP61247 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RPS3AP61247 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPS3AP61247 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RPS3AP61247 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
RPS3AP61247 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
RPS3AP61247 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPS3AP61247 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RPS3AP61247 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPS3AP61247 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RPS3AP61247 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPS3AP61247 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RPS3AP61247 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RPS3AP61247 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RPS3AP61247 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RPS3AP61247 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
RPS3AP61247 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms