Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC141586.1-203ENST00000567242 366 ntBASIC15.67■□□□□ 0.1
VCPP55072 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC15.67■□□□□ 0.1
VCPP55072 PPY2P-201ENST00000582808 702 ntBASIC15.67■□□□□ 0.1
VCPP55072 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VCPP55072 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC15.67■□□□□ 0.1
VCPP55072 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
VCPP55072 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.67■□□□□ 0.1
VCPP55072 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
VCPP55072 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VCPP55072 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
VCPP55072 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VCPP55072 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VCPP55072 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VCPP55072 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VCPP55072 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.67■□□□□ 0.1
VCPP55072 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VCPP55072 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VCPP55072 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VCPP55072 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VCPP55072 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
VCPP55072 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VCPP55072 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VCPP55072 AL137783.1-201ENST00000623494 1896 ntBASIC15.67■□□□□ 0.1
VCPP55072 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VCPP55072 AC015802.1-201ENST00000588104 1449 ntBASIC15.67■□□□□ 0.1
VCPP55072 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.67■□□□□ 0.1
VCPP55072 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
VCPP55072 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VCPP55072 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VCPP55072 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
VCPP55072 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VCPP55072 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VCPP55072 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
VCPP55072 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VCPP55072 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VCPP55072 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.66■□□□□ 0.1
VCPP55072 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VCPP55072 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
VCPP55072 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VCPP55072 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VCPP55072 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VCPP55072 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VCPP55072 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
VCPP55072 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.66■□□□□ 0.1
VCPP55072 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.66■□□□□ 0.1
VCPP55072 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VCPP55072 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.66■□□□□ 0.1
VCPP55072 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VCPP55072 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
VCPP55072 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.66■□□□□ 0.1
VCPP55072 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
VCPP55072 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC15.66■□□□□ 0.1
VCPP55072 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC15.66■□□□□ 0.1
VCPP55072 AC132192.2-201ENST00000596206 1147 ntBASIC15.66■□□□□ 0.1
VCPP55072 AL353770.1-201ENST00000614915 403 ntBASIC15.66■□□□□ 0.1
VCPP55072 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VCPP55072 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VCPP55072 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.66■□□□□ 0.1
VCPP55072 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VCPP55072 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.66■□□□□ 0.1
VCPP55072 HSPA7-201ENST00000445535 1927 ntBASIC15.66■□□□□ 0.1
VCPP55072 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
VCPP55072 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
VCPP55072 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VCPP55072 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
VCPP55072 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
VCPP55072 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VCPP55072 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VCPP55072 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
VCPP55072 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.65■□□□□ 0.1
VCPP55072 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.65■□□□□ 0.1
VCPP55072 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VCPP55072 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
VCPP55072 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VCPP55072 AC023090.2-201ENST00000625182 2110 ntBASIC15.65■□□□□ 0.1
VCPP55072 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
VCPP55072 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VCPP55072 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VCPP55072 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.65■□□□□ 0.1
VCPP55072 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VCPP55072 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
VCPP55072 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VCPP55072 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
VCPP55072 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.65■□□□□ 0.1
VCPP55072 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VCPP55072 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.65■□□□□ 0.1
VCPP55072 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VCPP55072 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.65■□□□□ 0.1
VCPP55072 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
VCPP55072 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VCPP55072 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
VCPP55072 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VCPP55072 DPM3-202ENST00000368399 517 ntBASIC15.65■□□□□ 0.1
VCPP55072 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC15.65■□□□□ 0.1
VCPP55072 PFN2-202ENST00000423691 911 ntTSL 2 BASIC15.65■□□□□ 0.1
VCPP55072 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
VCPP55072 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VCPP55072 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC15.65■□□□□ 0.1
VCPP55072 CTBP2P4-201ENST00000513884 920 ntBASIC15.65■□□□□ 0.1
VCPP55072 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms