Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.06■□□□□ 0.16
GPC3P51654 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GPC3P51654 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
GPC3P51654 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GPC3P51654 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
GPC3P51654 AC091046.1-201ENST00000331871 207 ntBASIC16.06■□□□□ 0.16
GPC3P51654 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.06■□□□□ 0.16
GPC3P51654 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.06■□□□□ 0.16
GPC3P51654 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC16.06■□□□□ 0.16
GPC3P51654 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.06■□□□□ 0.16
GPC3P51654 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.06■□□□□ 0.16
GPC3P51654 AC022447.6-201ENST00000515522 438 ntBASIC16.06■□□□□ 0.16
GPC3P51654 AC003686.1-201ENST00000550956 1034 ntBASIC16.06■□□□□ 0.16
GPC3P51654 AC242376.1-201ENST00000559033 726 ntBASIC16.06■□□□□ 0.16
GPC3P51654 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.06■□□□□ 0.16
GPC3P51654 MIR4754-201ENST00000582477 89 ntBASIC16.06■□□□□ 0.16
GPC3P51654 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.06■□□□□ 0.16
GPC3P51654 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.06■□□□□ 0.16
GPC3P51654 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.06■□□□□ 0.16
GPC3P51654 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
GPC3P51654 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
GPC3P51654 CDK7-214ENST00000626796 358 ntTSL 5 BASIC16.06■□□□□ 0.16
GPC3P51654 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.06■□□□□ 0.16
GPC3P51654 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GPC3P51654 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.06■□□□□ 0.16
GPC3P51654 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GPC3P51654 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GPC3P51654 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
GPC3P51654 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GPC3P51654 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.06■□□□□ 0.16
GPC3P51654 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GPC3P51654 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.05■□□□□ 0.16
GPC3P51654 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GPC3P51654 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
GPC3P51654 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GPC3P51654 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GPC3P51654 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GPC3P51654 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
GPC3P51654 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GPC3P51654 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.05■□□□□ 0.16
GPC3P51654 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
GPC3P51654 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GPC3P51654 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GPC3P51654 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GPC3P51654 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GPC3P51654 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.05■□□□□ 0.16
GPC3P51654 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GPC3P51654 AC005089.1-201ENST00000619486 2241 ntBASIC16.05■□□□□ 0.16
GPC3P51654 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GPC3P51654 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GPC3P51654 AC092506.1-202ENST00000401022 528 ntBASIC16.05■□□□□ 0.16
GPC3P51654 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.05■□□□□ 0.16
GPC3P51654 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.05■□□□□ 0.16
GPC3P51654 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.05■□□□□ 0.16
GPC3P51654 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GPC3P51654 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.05■□□□□ 0.16
GPC3P51654 RTN3P1-201ENST00000536295 711 ntBASIC16.05■□□□□ 0.16
GPC3P51654 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.05■□□□□ 0.16
GPC3P51654 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.05■□□□□ 0.16
GPC3P51654 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.05■□□□□ 0.16
GPC3P51654 MEG3_2.1-201ENST00000611456 105 ntBASIC16.05■□□□□ 0.16
GPC3P51654 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
GPC3P51654 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.05■□□□□ 0.16
GPC3P51654 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
GPC3P51654 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.05■□□□□ 0.16
GPC3P51654 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GPC3P51654 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.05■□□□□ 0.16
GPC3P51654 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.05■□□□□ 0.16
GPC3P51654 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GPC3P51654 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.04■□□□□ 0.16
GPC3P51654 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.04■□□□□ 0.16
GPC3P51654 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GPC3P51654 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.04■□□□□ 0.16
GPC3P51654 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
GPC3P51654 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.04■□□□□ 0.16
GPC3P51654 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GPC3P51654 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
GPC3P51654 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GPC3P51654 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
GPC3P51654 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
GPC3P51654 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
GPC3P51654 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GPC3P51654 AHCYP4-201ENST00000419201 1315 ntBASIC16.04■□□□□ 0.16
GPC3P51654 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GPC3P51654 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.04■□□□□ 0.16
GPC3P51654 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GPC3P51654 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
GPC3P51654 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GPC3P51654 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.04■□□□□ 0.16
GPC3P51654 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GPC3P51654 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.04■□□□□ 0.16
GPC3P51654 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.04■□□□□ 0.16
GPC3P51654 OR2R1P-201ENST00000441404 914 ntBASIC16.04■□□□□ 0.16
GPC3P51654 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC16.04■□□□□ 0.16
GPC3P51654 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.04■□□□□ 0.16
GPC3P51654 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.04■□□□□ 0.16
GPC3P51654 POU5F1P2-201ENST00000521750 823 ntBASIC16.04■□□□□ 0.16
GPC3P51654 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.04■□□□□ 0.16
GPC3P51654 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC16.04■□□□□ 0.16
GPC3P51654 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms