Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 SCARNA12-201ENST00000459155 270 ntBASIC15.98■□□□□ 0.15
CPT1AP50416 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC15.98■□□□□ 0.15
CPT1AP50416 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC15.98■□□□□ 0.15
CPT1AP50416 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC15.98■□□□□ 0.15
CPT1AP50416 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC15.98■□□□□ 0.15
CPT1AP50416 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CPT1AP50416 RN7SL357P-201ENST00000581065 298 ntBASIC15.98■□□□□ 0.15
CPT1AP50416 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC15.98■□□□□ 0.15
CPT1AP50416 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC15.98■□□□□ 0.15
CPT1AP50416 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC15.98■□□□□ 0.15
CPT1AP50416 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CPT1AP50416 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.98■□□□□ 0.15
CPT1AP50416 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPT1AP50416 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPT1AP50416 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPT1AP50416 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CPT1AP50416 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CPT1AP50416 PCDHA3-202ENST00000532566 4594 ntBASIC15.98■□□□□ 0.15
CPT1AP50416 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPT1AP50416 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPT1AP50416 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPT1AP50416 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.98■□□□□ 0.15
CPT1AP50416 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CPT1AP50416 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPT1AP50416 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPT1AP50416 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPT1AP50416 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
CPT1AP50416 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPT1AP50416 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPT1AP50416 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPT1AP50416 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.97■□□□□ 0.15
CPT1AP50416 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPT1AP50416 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPT1AP50416 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CPT1AP50416 AC064801.2-201ENST00000625052 1303 ntBASIC15.97■□□□□ 0.15
CPT1AP50416 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPT1AP50416 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.97■□□□□ 0.15
CPT1AP50416 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPT1AP50416 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CPT1AP50416 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CPT1AP50416 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.97■□□□□ 0.15
CPT1AP50416 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CPT1AP50416 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPT1AP50416 AL596257.1-201ENST00000641463 2694 ntBASIC15.97■□□□□ 0.15
CPT1AP50416 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPT1AP50416 AL354702.1-201ENST00000442006 1960 ntBASIC15.97■□□□□ 0.15
CPT1AP50416 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPT1AP50416 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPT1AP50416 AC013268.4-201ENST00000637413 2228 ntBASIC15.97■□□□□ 0.15
CPT1AP50416 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPT1AP50416 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPT1AP50416 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.97■□□□□ 0.15
CPT1AP50416 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CPT1AP50416 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC15.97■□□□□ 0.15
CPT1AP50416 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CPT1AP50416 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC15.97■□□□□ 0.15
CPT1AP50416 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CPT1AP50416 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC15.97■□□□□ 0.15
CPT1AP50416 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC15.97■□□□□ 0.15
CPT1AP50416 AC068867.1-201ENST00000559855 150 ntBASIC15.97■□□□□ 0.15
CPT1AP50416 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CPT1AP50416 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC15.97■□□□□ 0.15
CPT1AP50416 MIR5196-201ENST00000578146 115 ntBASIC15.97■□□□□ 0.15
CPT1AP50416 MIR4472-1-201ENST00000584349 80 ntBASIC15.97■□□□□ 0.15
CPT1AP50416 MIR6756-201ENST00000616240 63 ntBASIC15.97■□□□□ 0.15
CPT1AP50416 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CPT1AP50416 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPT1AP50416 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPT1AP50416 CCT8L1P-201ENST00000465400 1674 ntBASIC15.97■□□□□ 0.15
CPT1AP50416 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CPT1AP50416 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.97■□□□□ 0.15
CPT1AP50416 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.97■□□□□ 0.15
CPT1AP50416 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPT1AP50416 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPT1AP50416 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPT1AP50416 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CPT1AP50416 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPT1AP50416 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPT1AP50416 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPT1AP50416 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CPT1AP50416 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPT1AP50416 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPT1AP50416 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CPT1AP50416 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CPT1AP50416 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CPT1AP50416 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.96■□□□□ 0.15
CPT1AP50416 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.96■□□□□ 0.15
CPT1AP50416 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CPT1AP50416 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPT1AP50416 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPT1AP50416 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CPT1AP50416 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPT1AP50416 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.96■□□□□ 0.15
CPT1AP50416 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC15.96■□□□□ 0.15
CPT1AP50416 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.96■□□□□ 0.15
CPT1AP50416 CELP-201ENST00000411440 1249 ntTSL 5 BASIC15.96■□□□□ 0.15
CPT1AP50416 RPL35P9-201ENST00000446059 350 ntBASIC15.96■□□□□ 0.15
CPT1AP50416 RGS5-216ENST00000449680 788 ntTSL 3 BASIC15.96■□□□□ 0.15
CPT1AP50416 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CPT1AP50416 RN7SL767P-201ENST00000493013 295 ntBASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms