Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.89□□□□□ -0.35
CX3CR1P49238 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CX3CR1P49238 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CR1P49238 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CR1P49238 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CX3CR1P49238 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.88□□□□□ -0.35
CX3CR1P49238 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CR1P49238 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.88□□□□□ -0.35
CX3CR1P49238 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CR1P49238 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CX3CR1P49238 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
CX3CR1P49238 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CR1P49238 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CR1P49238 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CR1P49238 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.88□□□□□ -0.35
CX3CR1P49238 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CX3CR1P49238 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CR1P49238 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CX3CR1P49238 MIR193BHG-211ENST00000641433 5365 ntBASIC12.88□□□□□ -0.35
CX3CR1P49238 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CR1P49238 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CX3CR1P49238 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CR1P49238 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
CX3CR1P49238 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CR1P49238 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.88□□□□□ -0.35
CX3CR1P49238 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CR1P49238 RN7SKP175-201ENST00000408472 289 ntBASIC12.88□□□□□ -0.35
CX3CR1P49238 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CR1P49238 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CR1P49238 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CR1P49238 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CR1P49238 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC12.88□□□□□ -0.35
CX3CR1P49238 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.88□□□□□ -0.35
CX3CR1P49238 COQ6-210ENST00000554920 649 ntTSL 3 BASIC12.88□□□□□ -0.35
CX3CR1P49238 AC103988.2-201ENST00000561804 725 ntBASIC12.88□□□□□ -0.35
CX3CR1P49238 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.88□□□□□ -0.35
CX3CR1P49238 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.88□□□□□ -0.35
CX3CR1P49238 AC027307.3-201ENST00000594262 1100 ntBASIC12.88□□□□□ -0.35
CX3CR1P49238 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.88□□□□□ -0.35
CX3CR1P49238 AP001002.3-201ENST00000623482 206 ntBASIC12.88□□□□□ -0.35
CX3CR1P49238 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.88□□□□□ -0.35
CX3CR1P49238 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.88□□□□□ -0.35
CX3CR1P49238 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.88□□□□□ -0.35
CX3CR1P49238 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.88□□□□□ -0.35
CX3CR1P49238 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CR1P49238 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CR1P49238 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CR1P49238 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CR1P49238 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CR1P49238 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CR1P49238 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CR1P49238 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.88□□□□□ -0.35
CX3CR1P49238 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CR1P49238 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
CX3CR1P49238 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CR1P49238 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CR1P49238 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CR1P49238 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.88□□□□□ -0.35
CX3CR1P49238 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CR1P49238 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CR1P49238 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CR1P49238 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CR1P49238 AP000593.2-201ENST00000542775 1433 ntBASIC12.88□□□□□ -0.35
CX3CR1P49238 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.88□□□□□ -0.35
CX3CR1P49238 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CR1P49238 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CX3CR1P49238 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CX3CR1P49238 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CR1P49238 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CR1P49238 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CR1P49238 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CR1P49238 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CR1P49238 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CX3CR1P49238 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CR1P49238 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.87□□□□□ -0.35
CX3CR1P49238 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.87□□□□□ -0.35
CX3CR1P49238 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CR1P49238 KHSRPP1-201ENST00000427983 1768 ntBASIC12.87□□□□□ -0.35
CX3CR1P49238 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.87□□□□□ -0.35
CX3CR1P49238 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CR1P49238 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CR1P49238 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
CX3CR1P49238 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CR1P49238 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CX3CR1P49238 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CR1P49238 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CR1P49238 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CR1P49238 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CR1P49238 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.87□□□□□ -0.35
CX3CR1P49238 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CR1P49238 C2orf27AP3-201ENST00000434123 579 ntBASIC12.87□□□□□ -0.35
CX3CR1P49238 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CX3CR1P49238 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC12.87□□□□□ -0.35
CX3CR1P49238 AC007389.4-201ENST00000454674 793 ntBASIC12.87□□□□□ -0.35
CX3CR1P49238 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CR1P49238 RN7SL837P-201ENST00000463010 287 ntBASIC12.87□□□□□ -0.35
CX3CR1P49238 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CR1P49238 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.87□□□□□ -0.35
CX3CR1P49238 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.87□□□□□ -0.35
CX3CR1P49238 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms