Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 ZC4H2-201ENST00000337990 2363 ntTSL 2 BASIC9.46□□□□□ -0.89
PCP4P48539 PAMR1-208ENST00000621476 2842 ntTSL 2 BASIC9.46□□□□□ -0.89
PCP4P48539 COPA-202ENST00000368069 4664 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
PCP4P48539 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
PCP4P48539 CABIN1-204ENST00000405822 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
PCP4P48539 SYT16-201ENST00000430451 2029 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
PCP4P48539 UGGT2-203ENST00000376747 4832 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
PCP4P48539 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
PCP4P48539 ARHGAP44-201ENST00000262444 3001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
PCP4P48539 MICAL3-203ENST00000400561 3046 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
PCP4P48539 GRB2-205ENST00000392564 3182 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
PCP4P48539 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
PCP4P48539 AC078925.4-201ENST00000623737 1717 ntBASIC9.46□□□□□ -0.89
PCP4P48539 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PCP4P48539 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC9.46□□□□□ -0.9
PCP4P48539 PTGES3L-201ENST00000409446 1781 ntTSL 2 BASIC9.46□□□□□ -0.9
PCP4P48539 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC9.46□□□□□ -0.9
PCP4P48539 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PCP4P48539 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
PCP4P48539 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC9.46□□□□□ -0.9
PCP4P48539 AC007322.3-201ENST00000426526 701 ntBASIC9.46□□□□□ -0.9
PCP4P48539 FAAHP1-202ENST00000446499 1238 ntBASIC9.46□□□□□ -0.9
PCP4P48539 IGHV3-75-201ENST00000523951 358 ntBASIC9.46□□□□□ -0.9
PCP4P48539 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PCP4P48539 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
PCP4P48539 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PCP4P48539 PLEC-205ENST00000356346 14683 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
PCP4P48539 AC092123.2-201ENST00000611189 5421 ntBASIC9.46□□□□□ -0.9
PCP4P48539 PRPF40A-202ENST00000410080 8048 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
PCP4P48539 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC9.46□□□□□ -0.9
PCP4P48539 SUOX-203ENST00000394109 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PCP4P48539 PLAC4-201ENST00000623119 5588 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
PCP4P48539 BSND-201ENST00000371265 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PCP4P48539 LDB3-203ENST00000372056 1868 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
PCP4P48539 RNF138-202ENST00000261593 3570 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PCP4P48539 BTF3L4-201ENST00000313334 4703 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
PCP4P48539 CHERP-203ENST00000546361 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PCP4P48539 HSH2D-206ENST00000613986 1957 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
PCP4P48539 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
PCP4P48539 RTN3-204ENST00000354497 1407 ntTSL 2 BASIC9.46□□□□□ -0.9
PCP4P48539 DNAJB14-205ENST00000442697 6075 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PCP4P48539 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PCP4P48539 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
PCP4P48539 KDM4D-202ENST00000536741 2737 ntAPPRIS P1 TSL 4 BASIC9.46□□□□□ -0.9
PCP4P48539 SLC1A7-205ENST00000620288 3378 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
PCP4P48539 RPAP1-201ENST00000304330 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PCP4P48539 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC9.46□□□□□ -0.9
PCP4P48539 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PCP4P48539 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
PCP4P48539 LRRC8A-202ENST00000372599 4161 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
PCP4P48539 NAT10-202ENST00000527971 1600 ntTSL 2 BASIC9.45□□□□□ -0.9
PCP4P48539 ANAPC16-205ENST00000621663 3567 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
PCP4P48539 PACSIN1-201ENST00000244458 4231 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
PCP4P48539 ECE1-202ENST00000357071 3763 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
PCP4P48539 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
PCP4P48539 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
PCP4P48539 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
PCP4P48539 CYP2G1P-201ENST00000252909 2511 ntTSL 2 BASIC9.45□□□□□ -0.9
PCP4P48539 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
PCP4P48539 PYGL-206ENST00000544180 2696 ntTSL 2 BASIC9.45□□□□□ -0.9
PCP4P48539 AL592164.1-201ENST00000562814 1976 ntTSL 3 BASIC9.45□□□□□ -0.9
PCP4P48539 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
PCP4P48539 AC005041.1-201ENST00000517883 7033 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
PCP4P48539 CCDC85C-207ENST00000557769 3793 ntTSL 2 BASIC9.45□□□□□ -0.9
PCP4P48539 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
PCP4P48539 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
PCP4P48539 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
PCP4P48539 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC9.45□□□□□ -0.9
PCP4P48539 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC9.45□□□□□ -0.9
PCP4P48539 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC9.45□□□□□ -0.9
PCP4P48539 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC9.45□□□□□ -0.9
PCP4P48539 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
PCP4P48539 PTPRK-203ENST00000368207 4758 ntTSL 5 BASIC9.45□□□□□ -0.9
PCP4P48539 FOXP1-209ENST00000475937 4967 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
PCP4P48539 AC008132.1-203ENST00000412938 5920 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
PCP4P48539 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC9.45□□□□□ -0.9
PCP4P48539 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
PCP4P48539 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC9.45□□□□□ -0.9
PCP4P48539 AC087633.2-202ENST00000565166 1439 ntBASIC9.45□□□□□ -0.9
PCP4P48539 ZNF550-201ENST00000325134 4305 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
PCP4P48539 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
PCP4P48539 PDE11A-201ENST00000286063 9275 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
PCP4P48539 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
PCP4P48539 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
PCP4P48539 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
PCP4P48539 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
PCP4P48539 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
PCP4P48539 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
PCP4P48539 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
PCP4P48539 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
PCP4P48539 ZNF501-201ENST00000396048 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
PCP4P48539 KCNMA1-246ENST00000638848 4423 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
PCP4P48539 SPDYE3-201ENST00000332397 3185 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
PCP4P48539 DZIP1-202ENST00000361156 7011 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
PCP4P48539 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
PCP4P48539 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PCP4P48539 MAGED2-204ENST00000375058 2048 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
PCP4P48539 ECM1-202ENST00000369047 2070 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
PCP4P48539 ZNF684-203ENST00000372699 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PCP4P48539 DPP3P1-201ENST00000508984 2063 ntBASIC9.44□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms