Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AL365203.3-201ENST00000609742 2057 ntBASIC16.16■□□□□ 0.18
TM4SF4P48230 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC16.16■□□□□ 0.18
TM4SF4P48230 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TM4SF4P48230 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TM4SF4P48230 U3.5-201ENST00000363448 216 ntBASIC16.16■□□□□ 0.18
TM4SF4P48230 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TM4SF4P48230 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TM4SF4P48230 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TM4SF4P48230 RN7SKP212-201ENST00000410851 328 ntBASIC16.16■□□□□ 0.18
TM4SF4P48230 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC16.16■□□□□ 0.18
TM4SF4P48230 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC16.16■□□□□ 0.18
TM4SF4P48230 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC16.16■□□□□ 0.18
TM4SF4P48230 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TM4SF4P48230 RN7SL672P-201ENST00000474091 317 ntBASIC16.16■□□□□ 0.18
TM4SF4P48230 COQ10BP2-201ENST00000513804 724 ntBASIC16.16■□□□□ 0.18
TM4SF4P48230 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TM4SF4P48230 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TM4SF4P48230 AL031673.1-201ENST00000611460 466 ntBASIC16.16■□□□□ 0.18
TM4SF4P48230 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TM4SF4P48230 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.16■□□□□ 0.18
TM4SF4P48230 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC16.16■□□□□ 0.18
TM4SF4P48230 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
TM4SF4P48230 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
TM4SF4P48230 AL391005.1-201ENST00000623953 2435 ntBASIC16.16■□□□□ 0.18
TM4SF4P48230 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TM4SF4P48230 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TM4SF4P48230 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TM4SF4P48230 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TM4SF4P48230 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.16■□□□□ 0.18
TM4SF4P48230 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TM4SF4P48230 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC16.15■□□□□ 0.18
TM4SF4P48230 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TM4SF4P48230 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.15■□□□□ 0.18
TM4SF4P48230 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.15■□□□□ 0.18
TM4SF4P48230 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TM4SF4P48230 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TM4SF4P48230 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.15■□□□□ 0.18
TM4SF4P48230 CCL19-202ENST00000378800 414 ntTSL 2 BASIC16.15■□□□□ 0.18
TM4SF4P48230 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TM4SF4P48230 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TM4SF4P48230 KRT18P44-201ENST00000416086 1285 ntBASIC16.15■□□□□ 0.18
TM4SF4P48230 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.15■□□□□ 0.18
TM4SF4P48230 SNRPCP15-201ENST00000424055 192 ntBASIC16.15■□□□□ 0.18
TM4SF4P48230 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC16.15■□□□□ 0.18
TM4SF4P48230 AC053503.3-201ENST00000448375 114 ntBASIC16.15■□□□□ 0.18
TM4SF4P48230 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC16.15■□□□□ 0.18
TM4SF4P48230 AC090820.1-201ENST00000519722 591 ntBASIC16.15■□□□□ 0.18
TM4SF4P48230 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC16.15■□□□□ 0.18
TM4SF4P48230 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC16.15■□□□□ 0.18
TM4SF4P48230 RN7SL440P-201ENST00000577855 343 ntBASIC16.15■□□□□ 0.18
TM4SF4P48230 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC16.15■□□□□ 0.18
TM4SF4P48230 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TM4SF4P48230 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC16.15■□□□□ 0.18
TM4SF4P48230 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC16.15■□□□□ 0.18
TM4SF4P48230 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TM4SF4P48230 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TM4SF4P48230 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TM4SF4P48230 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TM4SF4P48230 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.15■□□□□ 0.18
TM4SF4P48230 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.15■□□□□ 0.18
TM4SF4P48230 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TM4SF4P48230 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TM4SF4P48230 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.15■□□□□ 0.18
TM4SF4P48230 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TM4SF4P48230 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TM4SF4P48230 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TM4SF4P48230 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
TM4SF4P48230 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TM4SF4P48230 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
TM4SF4P48230 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TM4SF4P48230 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TM4SF4P48230 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TM4SF4P48230 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.14■□□□□ 0.17
TM4SF4P48230 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TM4SF4P48230 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.14■□□□□ 0.17
TM4SF4P48230 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TM4SF4P48230 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TM4SF4P48230 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TM4SF4P48230 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TM4SF4P48230 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.14■□□□□ 0.17
TM4SF4P48230 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.14■□□□□ 0.17
TM4SF4P48230 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TM4SF4P48230 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TM4SF4P48230 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TM4SF4P48230 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TM4SF4P48230 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
TM4SF4P48230 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TM4SF4P48230 KRT18P33-201ENST00000398525 1043 ntBASIC16.14■□□□□ 0.17
TM4SF4P48230 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC16.14■□□□□ 0.17
TM4SF4P48230 SAP18P2-201ENST00000434334 459 ntBASIC16.14■□□□□ 0.17
TM4SF4P48230 CCND3P1-201ENST00000438347 580 ntBASIC16.14■□□□□ 0.17
TM4SF4P48230 HNRNPA1P10-201ENST00000444945 962 ntBASIC16.14■□□□□ 0.17
TM4SF4P48230 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC16.14■□□□□ 0.17
TM4SF4P48230 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC16.14■□□□□ 0.17
TM4SF4P48230 SNRPD2P2-201ENST00000473818 333 ntBASIC16.14■□□□□ 0.17
TM4SF4P48230 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TM4SF4P48230 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC16.14■□□□□ 0.17
TM4SF4P48230 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
TM4SF4P48230 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC16.14■□□□□ 0.17
TM4SF4P48230 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms