Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
NEDD4P46934 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
NEDD4P46934 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
NEDD4P46934 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
NEDD4P46934 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NEDD4P46934 AC092580.1-201ENST00000433998 658 ntBASIC17.07■□□□□ 0.32
NEDD4P46934 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.07■□□□□ 0.32
NEDD4P46934 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.07■□□□□ 0.32
NEDD4P46934 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC17.07■□□□□ 0.32
NEDD4P46934 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.07■□□□□ 0.32
NEDD4P46934 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.07■□□□□ 0.32
NEDD4P46934 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
NEDD4P46934 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC17.07■□□□□ 0.32
NEDD4P46934 AL805961.1-203ENST00000641078 1258 ntBASIC17.07■□□□□ 0.32
NEDD4P46934 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
NEDD4P46934 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC17.07■□□□□ 0.32
NEDD4P46934 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
NEDD4P46934 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NEDD4P46934 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NEDD4P46934 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NEDD4P46934 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
NEDD4P46934 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NEDD4P46934 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NEDD4P46934 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC17.07■□□□□ 0.32
NEDD4P46934 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.07■□□□□ 0.32
NEDD4P46934 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NEDD4P46934 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC17.07■□□□□ 0.32
NEDD4P46934 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NEDD4P46934 AC104581.4-201ENST00000623126 3052 ntBASIC17.06■□□□□ 0.32
NEDD4P46934 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.06■□□□□ 0.32
NEDD4P46934 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD4P46934 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD4P46934 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NEDD4P46934 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
NEDD4P46934 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC17.06■□□□□ 0.32
NEDD4P46934 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD4P46934 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NEDD4P46934 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD4P46934 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC17.06■□□□□ 0.32
NEDD4P46934 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD4P46934 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD4P46934 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD4P46934 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD4P46934 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD4P46934 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD4P46934 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD4P46934 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD4P46934 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD4P46934 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD4P46934 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD4P46934 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC17.06■□□□□ 0.32
NEDD4P46934 AC011742.3-201ENST00000439053 820 ntBASIC17.06■□□□□ 0.32
NEDD4P46934 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.06■□□□□ 0.32
NEDD4P46934 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.06■□□□□ 0.32
NEDD4P46934 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.06■□□□□ 0.32
NEDD4P46934 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.06■□□□□ 0.32
NEDD4P46934 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD4P46934 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC17.06■□□□□ 0.32
NEDD4P46934 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.06■□□□□ 0.32
NEDD4P46934 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
NEDD4P46934 NDUFV2P1-201ENST00000596415 907 ntBASIC17.06■□□□□ 0.32
NEDD4P46934 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
NEDD4P46934 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.06■□□□□ 0.32
NEDD4P46934 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
NEDD4P46934 AC090386.2-201ENST00000623010 1039 ntBASIC17.06■□□□□ 0.32
NEDD4P46934 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.06■□□□□ 0.32
NEDD4P46934 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.06■□□□□ 0.32
NEDD4P46934 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC17.06■□□□□ 0.32
NEDD4P46934 C1R-201ENST00000535233 2211 ntTSL 2 BASIC17.06■□□□□ 0.32
NEDD4P46934 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC17.06■□□□□ 0.32
NEDD4P46934 KRT8P21-201ENST00000430398 1491 ntBASIC17.06■□□□□ 0.32
NEDD4P46934 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
NEDD4P46934 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD4P46934 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD4P46934 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD4P46934 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD4P46934 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD4P46934 LINC01165-201ENST00000445190 1623 ntBASIC17.06■□□□□ 0.32
NEDD4P46934 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NEDD4P46934 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
NEDD4P46934 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD4P46934 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEDD4P46934 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NEDD4P46934 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NEDD4P46934 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD4P46934 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD4P46934 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.05■□□□□ 0.32
NEDD4P46934 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD4P46934 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD4P46934 RN7SKP214-201ENST00000364208 315 ntBASIC17.05■□□□□ 0.32
NEDD4P46934 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD4P46934 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD4P46934 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
NEDD4P46934 CYP46A4P-201ENST00000414953 267 ntBASIC17.05■□□□□ 0.32
NEDD4P46934 CALR4P-201ENST00000431943 946 ntBASIC17.05■□□□□ 0.32
NEDD4P46934 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.05■□□□□ 0.32
NEDD4P46934 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.05■□□□□ 0.32
NEDD4P46934 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.05■□□□□ 0.32
NEDD4P46934 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.05■□□□□ 0.32
NEDD4P46934 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms