Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC15.23■□□□□ 0.03
MTHFRP42898 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.23■□□□□ 0.03
MTHFRP42898 AL139008.1-201ENST00000437894 228 ntBASIC15.23■□□□□ 0.03
MTHFRP42898 OR2R1P-201ENST00000441404 914 ntBASIC15.23■□□□□ 0.03
MTHFRP42898 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
MTHFRP42898 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC15.23■□□□□ 0.03
MTHFRP42898 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MTHFRP42898 MT3-203ENST00000565838 421 ntTSL 3 BASIC15.23■□□□□ 0.03
MTHFRP42898 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC15.23■□□□□ 0.03
MTHFRP42898 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC15.23■□□□□ 0.03
MTHFRP42898 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC15.23■□□□□ 0.03
MTHFRP42898 AL022334.2-201ENST00000610000 484 ntBASIC15.23■□□□□ 0.03
MTHFRP42898 CMC2-224ENST00000630396 481 ntTSL 5 BASIC15.23■□□□□ 0.03
MTHFRP42898 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MTHFRP42898 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC15.23■□□□□ 0.03
MTHFRP42898 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MTHFRP42898 AL365209.1-201ENST00000624418 6473 ntBASIC15.23■□□□□ 0.03
MTHFRP42898 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MTHFRP42898 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MTHFRP42898 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MTHFRP42898 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.23■□□□□ 0.03
MTHFRP42898 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MTHFRP42898 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MTHFRP42898 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MTHFRP42898 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MTHFRP42898 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MTHFRP42898 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MTHFRP42898 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.23■□□□□ 0.03
MTHFRP42898 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MTHFRP42898 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MTHFRP42898 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
MTHFRP42898 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.22■□□□□ 0.03
MTHFRP42898 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.22■□□□□ 0.03
MTHFRP42898 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MTHFRP42898 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MTHFRP42898 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
MTHFRP42898 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.22■□□□□ 0.03
MTHFRP42898 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.22■□□□□ 0.03
MTHFRP42898 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MTHFRP42898 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MTHFRP42898 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.22■□□□□ 0.03
MTHFRP42898 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
MTHFRP42898 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.22■□□□□ 0.03
MTHFRP42898 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
MTHFRP42898 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MTHFRP42898 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MTHFRP42898 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
MTHFRP42898 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MTHFRP42898 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
MTHFRP42898 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MTHFRP42898 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC15.22■□□□□ 0.03
MTHFRP42898 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC15.22■□□□□ 0.03
MTHFRP42898 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MTHFRP42898 PSMD4P1-201ENST00000433951 1109 ntBASIC15.22■□□□□ 0.03
MTHFRP42898 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC15.22■□□□□ 0.03
MTHFRP42898 RPS23-204ENST00000507980 836 ntTSL 2 BASIC15.22■□□□□ 0.03
MTHFRP42898 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC15.22■□□□□ 0.03
MTHFRP42898 CR383656.3-201ENST00000551315 183 ntBASIC15.22■□□□□ 0.03
MTHFRP42898 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC15.22■□□□□ 0.03
MTHFRP42898 MIR4472-1-201ENST00000584349 80 ntBASIC15.22■□□□□ 0.03
MTHFRP42898 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC15.22■□□□□ 0.03
MTHFRP42898 RNF146-211ENST00000609447 607 ntTSL 4 BASIC15.22■□□□□ 0.03
MTHFRP42898 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC15.22■□□□□ 0.03
MTHFRP42898 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
MTHFRP42898 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC15.22■□□□□ 0.03
MTHFRP42898 LINC00431-202ENST00000636375 159 ntBASIC15.22■□□□□ 0.03
MTHFRP42898 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MTHFRP42898 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MTHFRP42898 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.22■□□□□ 0.03
MTHFRP42898 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MTHFRP42898 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
MTHFRP42898 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
MTHFRP42898 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
MTHFRP42898 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.22■□□□□ 0.03
MTHFRP42898 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MTHFRP42898 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MTHFRP42898 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.22■□□□□ 0.03
MTHFRP42898 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
MTHFRP42898 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MTHFRP42898 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
MTHFRP42898 HLA-DQB1-202ENST00000399079 1501 ntBASIC15.22■□□□□ 0.03
MTHFRP42898 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MTHFRP42898 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MTHFRP42898 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MTHFRP42898 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MTHFRP42898 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MTHFRP42898 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
MTHFRP42898 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.21■□□□□ 0.03
MTHFRP42898 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
MTHFRP42898 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MTHFRP42898 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MTHFRP42898 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MTHFRP42898 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.21■□□□□ 0.03
MTHFRP42898 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.21■□□□□ 0.03
MTHFRP42898 AC009093.10-201ENST00000641956 1442 ntBASIC15.21■□□□□ 0.03
MTHFRP42898 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MTHFRP42898 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MTHFRP42898 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC15.21■□□□□ 0.03
MTHFRP42898 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
MTHFRP42898 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms