Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TNFSF9P41273 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFSF9P41273 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.69■□□□□ 0.1
TNFSF9P41273 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TNFSF9P41273 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.69■□□□□ 0.1
TNFSF9P41273 AC099063.4-201ENST00000641099 1602 ntBASIC15.69■□□□□ 0.1
TNFSF9P41273 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFSF9P41273 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TNFSF9P41273 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TNFSF9P41273 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFSF9P41273 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TNFSF9P41273 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.69■□□□□ 0.1
TNFSF9P41273 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFSF9P41273 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TNFSF9P41273 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TNFSF9P41273 AL008707.1-201ENST00000422498 534 ntBASIC15.69■□□□□ 0.1
TNFSF9P41273 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.69■□□□□ 0.1
TNFSF9P41273 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.69■□□□□ 0.1
TNFSF9P41273 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC15.69■□□□□ 0.1
TNFSF9P41273 AC012618.1-201ENST00000461223 412 ntBASIC15.69■□□□□ 0.1
TNFSF9P41273 AC024681.1-201ENST00000521917 487 ntBASIC15.69■□□□□ 0.1
TNFSF9P41273 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.69■□□□□ 0.1
TNFSF9P41273 RN7SL574P-201ENST00000581512 297 ntBASIC15.69■□□□□ 0.1
TNFSF9P41273 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC15.69■□□□□ 0.1
TNFSF9P41273 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC15.69■□□□□ 0.1
TNFSF9P41273 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
TNFSF9P41273 AC021016.3-201ENST00000608367 477 ntBASIC15.69■□□□□ 0.1
TNFSF9P41273 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.69■□□□□ 0.1
TNFSF9P41273 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.69■□□□□ 0.1
TNFSF9P41273 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFSF9P41273 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TNFSF9P41273 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
TNFSF9P41273 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TNFSF9P41273 LAP3P2-201ENST00000454686 1454 ntBASIC15.69■□□□□ 0.1
TNFSF9P41273 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TNFSF9P41273 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFSF9P41273 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
TNFSF9P41273 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.69■□□□□ 0.1
TNFSF9P41273 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFSF9P41273 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TNFSF9P41273 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFSF9P41273 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFSF9P41273 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.69■□□□□ 0.1
TNFSF9P41273 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TNFSF9P41273 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFSF9P41273 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFSF9P41273 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TNFSF9P41273 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFSF9P41273 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TNFSF9P41273 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.69■□□□□ 0.1
TNFSF9P41273 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TNFSF9P41273 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF9P41273 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.68■□□□□ 0.1
TNFSF9P41273 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF9P41273 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.68■□□□□ 0.1
TNFSF9P41273 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.68■□□□□ 0.1
TNFSF9P41273 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF9P41273 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF9P41273 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF9P41273 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF9P41273 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TNFSF9P41273 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF9P41273 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF9P41273 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF9P41273 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.68■□□□□ 0.1
TNFSF9P41273 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.68■□□□□ 0.1
TNFSF9P41273 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TNFSF9P41273 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.68■□□□□ 0.1
TNFSF9P41273 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF9P41273 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TNFSF9P41273 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TNFSF9P41273 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF9P41273 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TNFSF9P41273 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TNFSF9P41273 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF9P41273 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.68■□□□□ 0.1
TNFSF9P41273 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.68■□□□□ 0.1
TNFSF9P41273 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
TNFSF9P41273 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF9P41273 SLC25A24P2-201ENST00000415059 510 ntBASIC15.68■□□□□ 0.1
TNFSF9P41273 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.68■□□□□ 0.1
TNFSF9P41273 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF9P41273 TSPY25P-201ENST00000429463 745 ntBASIC15.68■□□□□ 0.1
TNFSF9P41273 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.68■□□□□ 0.1
TNFSF9P41273 Z97180.1-201ENST00000445173 988 ntBASIC15.68■□□□□ 0.1
TNFSF9P41273 AC073150.1-201ENST00000450406 1084 ntBASIC15.68■□□□□ 0.1
TNFSF9P41273 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC15.68■□□□□ 0.1
TNFSF9P41273 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.68■□□□□ 0.1
TNFSF9P41273 AC090857.1-201ENST00000527400 390 ntBASIC15.68■□□□□ 0.1
TNFSF9P41273 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.68■□□□□ 0.1
TNFSF9P41273 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC15.68■□□□□ 0.1
TNFSF9P41273 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC15.68■□□□□ 0.1
TNFSF9P41273 AF254983.2-201ENST00000612331 135 ntBASIC15.68■□□□□ 0.1
TNFSF9P41273 AC090386.2-201ENST00000623010 1039 ntBASIC15.68■□□□□ 0.1
TNFSF9P41273 AC138627.1-207ENST00000641560 1006 ntBASIC15.68■□□□□ 0.1
TNFSF9P41273 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.68■□□□□ 0.1
TNFSF9P41273 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF9P41273 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF9P41273 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF9P41273 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms