Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC17.74■□□□□ 0.43
PDE6BP35913 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC17.74■□□□□ 0.43
PDE6BP35913 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC17.74■□□□□ 0.43
PDE6BP35913 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDE6BP35913 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PDE6BP35913 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDE6BP35913 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDE6BP35913 MSANTD2P1-201ENST00000445341 1368 ntBASIC17.74■□□□□ 0.43
PDE6BP35913 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDE6BP35913 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDE6BP35913 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDE6BP35913 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDE6BP35913 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDE6BP35913 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDE6BP35913 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDE6BP35913 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
PDE6BP35913 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDE6BP35913 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.74■□□□□ 0.43
PDE6BP35913 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDE6BP35913 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDE6BP35913 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDE6BP35913 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDE6BP35913 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDE6BP35913 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.73■□□□□ 0.43
PDE6BP35913 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDE6BP35913 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PDE6BP35913 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDE6BP35913 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDE6BP35913 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDE6BP35913 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDE6BP35913 HLA-DPA2-205ENST00000433582 733 ntBASIC17.73■□□□□ 0.43
PDE6BP35913 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC17.73■□□□□ 0.43
PDE6BP35913 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDE6BP35913 ALG1L3P-201ENST00000503331 765 ntBASIC17.73■□□□□ 0.43
PDE6BP35913 AC106047.2-201ENST00000511723 743 ntBASIC17.73■□□□□ 0.43
PDE6BP35913 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC17.73■□□□□ 0.43
PDE6BP35913 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC17.73■□□□□ 0.43
PDE6BP35913 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
PDE6BP35913 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDE6BP35913 VENTXP3-201ENST00000546480 773 ntBASIC17.73■□□□□ 0.43
PDE6BP35913 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC17.73■□□□□ 0.43
PDE6BP35913 FOXN3-AS2-201ENST00000554071 1262 ntBASIC17.73■□□□□ 0.43
PDE6BP35913 ABHD17AP9-201ENST00000561925 548 ntBASIC17.73■□□□□ 0.43
PDE6BP35913 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC17.73■□□□□ 0.43
PDE6BP35913 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
PDE6BP35913 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDE6BP35913 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC17.73■□□□□ 0.43
PDE6BP35913 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC17.73■□□□□ 0.43
PDE6BP35913 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDE6BP35913 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.73■□□□□ 0.43
PDE6BP35913 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC17.73■□□□□ 0.43
PDE6BP35913 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDE6BP35913 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDE6BP35913 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.73■□□□□ 0.43
PDE6BP35913 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDE6BP35913 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.73■□□□□ 0.43
PDE6BP35913 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDE6BP35913 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC17.72■□□□□ 0.43
PDE6BP35913 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE6BP35913 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE6BP35913 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PDE6BP35913 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE6BP35913 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PDE6BP35913 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE6BP35913 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.72■□□□□ 0.43
PDE6BP35913 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC17.72■□□□□ 0.43
PDE6BP35913 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDE6BP35913 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC17.72■□□□□ 0.43
PDE6BP35913 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC17.72■□□□□ 0.43
PDE6BP35913 AL109809.1-201ENST00000418979 1367 ntBASIC17.72■□□□□ 0.43
PDE6BP35913 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE6BP35913 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDE6BP35913 AP000354.1-201ENST00000396982 456 ntBASIC17.72■□□□□ 0.43
PDE6BP35913 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE6BP35913 BPIFB5P-201ENST00000457066 1099 ntBASIC17.72■□□□□ 0.43
PDE6BP35913 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC17.72■□□□□ 0.43
PDE6BP35913 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC17.72■□□□□ 0.43
PDE6BP35913 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC17.72■□□□□ 0.43
PDE6BP35913 RPS23-207ENST00000511844 530 ntTSL 2 BASIC17.72■□□□□ 0.43
PDE6BP35913 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDE6BP35913 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDE6BP35913 KLF17P1-201ENST00000547105 1126 ntBASIC17.72■□□□□ 0.43
PDE6BP35913 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC17.72■□□□□ 0.43
PDE6BP35913 AC068831.5-201ENST00000557387 328 ntBASIC17.72■□□□□ 0.43
PDE6BP35913 MT2A-202ENST00000561491 581 ntTSL 2 BASIC17.72■□□□□ 0.43
PDE6BP35913 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE6BP35913 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
PDE6BP35913 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE6BP35913 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE6BP35913 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDE6BP35913 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE6BP35913 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDE6BP35913 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE6BP35913 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PDE6BP35913 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE6BP35913 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE6BP35913 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
PDE6BP35913 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.72■□□□□ 0.43
PDE6BP35913 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE6BP35913 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms