Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RAB3BP20337 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB3BP20337 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
RAB3BP20337 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.86□□□□□ -0.35
RAB3BP20337 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB3BP20337 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB3BP20337 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
RAB3BP20337 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.85□□□□□ -0.35
RAB3BP20337 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.85□□□□□ -0.35
RAB3BP20337 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.85□□□□□ -0.35
RAB3BP20337 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
RAB3BP20337 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
RAB3BP20337 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
RAB3BP20337 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
RAB3BP20337 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.85□□□□□ -0.35
RAB3BP20337 AL139094.1-201ENST00000405549 1188 ntBASIC12.85□□□□□ -0.35
RAB3BP20337 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC12.85□□□□□ -0.35
RAB3BP20337 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC12.85□□□□□ -0.35
RAB3BP20337 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.85□□□□□ -0.35
RAB3BP20337 AC023141.5-201ENST00000458585 616 ntBASIC12.85□□□□□ -0.35
RAB3BP20337 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.85□□□□□ -0.35
RAB3BP20337 AC026434.2-201ENST00000506094 1078 ntBASIC12.85□□□□□ -0.35
RAB3BP20337 AC026410.3-201ENST00000514280 936 ntBASIC12.85□□□□□ -0.35
RAB3BP20337 AC022616.1-201ENST00000518688 554 ntBASIC12.85□□□□□ -0.35
RAB3BP20337 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
RAB3BP20337 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.85□□□□□ -0.35
RAB3BP20337 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.85□□□□□ -0.35
RAB3BP20337 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.85□□□□□ -0.35
RAB3BP20337 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC12.85□□□□□ -0.35
RAB3BP20337 AL596442.2-201ENST00000610240 980 ntBASIC12.85□□□□□ -0.35
RAB3BP20337 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.85□□□□□ -0.35
RAB3BP20337 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.85□□□□□ -0.35
RAB3BP20337 SPDYE12P-201ENST00000618416 771 ntBASIC12.85□□□□□ -0.35
RAB3BP20337 PRSS30P-206ENST00000641773 873 ntBASIC12.85□□□□□ -0.35
RAB3BP20337 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.85□□□□□ -0.35
RAB3BP20337 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.85□□□□□ -0.35
RAB3BP20337 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.85□□□□□ -0.35
RAB3BP20337 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
RAB3BP20337 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
RAB3BP20337 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 CES1P1-201ENST00000421606 1704 ntBASIC12.85□□□□□ -0.35
RAB3BP20337 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
RAB3BP20337 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.85□□□□□ -0.35
RAB3BP20337 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
RAB3BP20337 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.85□□□□□ -0.35
RAB3BP20337 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB3BP20337 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAB3BP20337 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
RAB3BP20337 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB3BP20337 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAB3BP20337 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
RAB3BP20337 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
RAB3BP20337 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
RAB3BP20337 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.84□□□□□ -0.35
RAB3BP20337 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAB3BP20337 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAB3BP20337 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
RAB3BP20337 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB3BP20337 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAB3BP20337 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.84□□□□□ -0.35
RAB3BP20337 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAB3BP20337 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.84□□□□□ -0.35
RAB3BP20337 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.84□□□□□ -0.35
RAB3BP20337 SORD2P-201ENST00000558556 1069 ntBASIC12.84□□□□□ -0.35
RAB3BP20337 AC044860.1-202ENST00000559481 777 ntBASIC12.84□□□□□ -0.35
RAB3BP20337 AC092337.1-201ENST00000568699 1129 ntBASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms