Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD58P19256 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.69■□□□□ 0.1
CD58P19256 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.69■□□□□ 0.1
CD58P19256 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.69■□□□□ 0.1
CD58P19256 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.69■□□□□ 0.1
CD58P19256 KLF2P1-201ENST00000447438 1042 ntBASIC15.69■□□□□ 0.1
CD58P19256 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CD58P19256 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD58P19256 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.69■□□□□ 0.1
CD58P19256 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.69■□□□□ 0.1
CD58P19256 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CD58P19256 AC091271.1-201ENST00000611877 1162 ntBASIC15.69■□□□□ 0.1
CD58P19256 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.69■□□□□ 0.1
CD58P19256 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.69■□□□□ 0.1
CD58P19256 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.69■□□□□ 0.1
CD58P19256 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.69■□□□□ 0.1
CD58P19256 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.69■□□□□ 0.1
CD58P19256 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CD58P19256 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CD58P19256 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CD58P19256 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CD58P19256 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD58P19256 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD58P19256 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD58P19256 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD58P19256 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CD58P19256 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD58P19256 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD58P19256 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
CD58P19256 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.69■□□□□ 0.1
CD58P19256 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD58P19256 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CD58P19256 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.69■□□□□ 0.1
CD58P19256 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD58P19256 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CD58P19256 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.69■□□□□ 0.1
CD58P19256 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.69■□□□□ 0.1
CD58P19256 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.68■□□□□ 0.1
CD58P19256 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD58P19256 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD58P19256 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.68■□□□□ 0.1
CD58P19256 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
CD58P19256 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD58P19256 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CD58P19256 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD58P19256 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
CD58P19256 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.68■□□□□ 0.1
CD58P19256 RN7SL832P-201ENST00000607781 1756 ntBASIC15.68■□□□□ 0.1
CD58P19256 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD58P19256 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD58P19256 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD58P19256 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD58P19256 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.68■□□□□ 0.1
CD58P19256 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.68■□□□□ 0.1
CD58P19256 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD58P19256 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.68■□□□□ 0.1
CD58P19256 AC007274.1-201ENST00000439805 662 ntBASIC15.68■□□□□ 0.1
CD58P19256 AC244107.1-201ENST00000442033 332 ntBASIC15.68■□□□□ 0.1
CD58P19256 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
CD58P19256 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.68■□□□□ 0.1
CD58P19256 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.68■□□□□ 0.1
CD58P19256 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.68■□□□□ 0.1
CD58P19256 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.68■□□□□ 0.1
CD58P19256 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.68■□□□□ 0.1
CD58P19256 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CD58P19256 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD58P19256 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.68■□□□□ 0.1
CD58P19256 MIR6720-201ENST00000611664 98 ntBASIC15.68■□□□□ 0.1
CD58P19256 AC005695.3-201ENST00000614522 232 ntBASIC15.68■□□□□ 0.1
CD58P19256 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD58P19256 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.68■□□□□ 0.1
CD58P19256 AL162426.1-201ENST00000624141 743 ntBASIC15.68■□□□□ 0.1
CD58P19256 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.68■□□□□ 0.1
CD58P19256 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CD58P19256 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.68■□□□□ 0.1
CD58P19256 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD58P19256 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.68■□□□□ 0.1
CD58P19256 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD58P19256 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD58P19256 HSPA7-201ENST00000445535 1927 ntBASIC15.68■□□□□ 0.1
CD58P19256 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD58P19256 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
CD58P19256 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD58P19256 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD58P19256 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CD58P19256 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD58P19256 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CD58P19256 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD58P19256 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD58P19256 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CD58P19256 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.68■□□□□ 0.1
CD58P19256 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD58P19256 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD58P19256 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CD58P19256 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.67■□□□□ 0.1
CD58P19256 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.67■□□□□ 0.1
CD58P19256 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD58P19256 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD58P19256 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD58P19256 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms