Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15□□□□□ -0.01
ERCC2P18074 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15□□□□□ -0.01
ERCC2P18074 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15□□□□□ -0.01
ERCC2P18074 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ERCC2P18074 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
ERCC2P18074 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
ERCC2P18074 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15□□□□□ -0.01
ERCC2P18074 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ERCC2P18074 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ERCC2P18074 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15□□□□□ -0.01
ERCC2P18074 TUBB1P2-201ENST00000422712 1306 ntBASIC15□□□□□ -0.01
ERCC2P18074 TUBB1P1-201ENST00000503144 1300 ntBASIC15□□□□□ -0.01
ERCC2P18074 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ERCC2P18074 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15□□□□□ -0.01
ERCC2P18074 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15□□□□□ -0.01
ERCC2P18074 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ERCC2P18074 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15□□□□□ -0.01
ERCC2P18074 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
ERCC2P18074 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ERCC2P18074 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15□□□□□ -0.01
ERCC2P18074 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ERCC2P18074 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15□□□□□ -0.01
ERCC2P18074 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15□□□□□ -0.01
ERCC2P18074 MIR663B-201ENST00000408361 115 ntBASIC15□□□□□ -0.01
ERCC2P18074 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
ERCC2P18074 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15□□□□□ -0.01
ERCC2P18074 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15□□□□□ -0.01
ERCC2P18074 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15□□□□□ -0.01
ERCC2P18074 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15□□□□□ -0.01
ERCC2P18074 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15□□□□□ -0.01
ERCC2P18074 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15□□□□□ -0.01
ERCC2P18074 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15□□□□□ -0.01
ERCC2P18074 AC005962.1-201ENST00000584100 773 ntBASIC15□□□□□ -0.01
ERCC2P18074 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15□□□□□ -0.01
ERCC2P18074 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15□□□□□ -0.01
ERCC2P18074 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15□□□□□ -0.01
ERCC2P18074 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15□□□□□ -0.01
ERCC2P18074 AC009884.2-201ENST00000603110 324 ntBASIC15□□□□□ -0.01
ERCC2P18074 AC104506.1-201ENST00000609247 429 ntBASIC15□□□□□ -0.01
ERCC2P18074 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15□□□□□ -0.01
ERCC2P18074 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15□□□□□ -0.01
ERCC2P18074 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15□□□□□ -0.01
ERCC2P18074 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15□□□□□ -0.01
ERCC2P18074 SBF1P1-201ENST00000444527 5631 ntBASIC15□□□□□ -0.01
ERCC2P18074 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15□□□□□ -0.01
ERCC2P18074 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
ERCC2P18074 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
ERCC2P18074 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
ERCC2P18074 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
ERCC2P18074 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15□□□□□ -0.01
ERCC2P18074 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ERCC2P18074 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
ERCC2P18074 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
ERCC2P18074 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ERCC2P18074 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ERCC2P18074 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ERCC2P18074 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
ERCC2P18074 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
ERCC2P18074 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ERCC2P18074 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.99□□□□□ -0.01
ERCC2P18074 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.99□□□□□ -0.01
ERCC2P18074 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
ERCC2P18074 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
ERCC2P18074 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ERCC2P18074 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ERCC2P18074 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ERCC2P18074 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ERCC2P18074 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.99□□□□□ -0.01
ERCC2P18074 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.99□□□□□ -0.01
ERCC2P18074 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.99□□□□□ -0.01
ERCC2P18074 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.99□□□□□ -0.01
ERCC2P18074 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.99□□□□□ -0.01
ERCC2P18074 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.99□□□□□ -0.01
ERCC2P18074 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ERCC2P18074 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.99□□□□□ -0.01
ERCC2P18074 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.99□□□□□ -0.01
ERCC2P18074 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.99□□□□□ -0.01
ERCC2P18074 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.99□□□□□ -0.01
ERCC2P18074 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ERCC2P18074 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ERCC2P18074 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ERCC2P18074 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ERCC2P18074 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.99□□□□□ -0.01
ERCC2P18074 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ERCC2P18074 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ERCC2P18074 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.99□□□□□ -0.01
ERCC2P18074 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ERCC2P18074 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
ERCC2P18074 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.99□□□□□ -0.01
ERCC2P18074 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
ERCC2P18074 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.99□□□□□ -0.01
ERCC2P18074 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ERCC2P18074 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC2P18074 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC2P18074 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
ERCC2P18074 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC2P18074 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.98□□□□□ -0.01
ERCC2P18074 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC2P18074 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC2P18074 REXO1L6P-201ENST00000603433 1515 ntBASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms