Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
PRKCAP17252 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.63□□□□□ -0.23
PRKCAP17252 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCAP17252 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
PRKCAP17252 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCAP17252 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCAP17252 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.63□□□□□ -0.23
PRKCAP17252 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCAP17252 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.63□□□□□ -0.23
PRKCAP17252 BX640514.1-201ENST00000583223 1918 ntBASIC13.63□□□□□ -0.23
PRKCAP17252 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCAP17252 AC019294.4-201ENST00000561777 2905 ntBASIC13.63□□□□□ -0.23
PRKCAP17252 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCAP17252 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
PRKCAP17252 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.63□□□□□ -0.23
PRKCAP17252 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCAP17252 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCAP17252 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCAP17252 AC007551.1-201ENST00000457394 519 ntBASIC13.63□□□□□ -0.23
PRKCAP17252 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
PRKCAP17252 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCAP17252 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
PRKCAP17252 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.63□□□□□ -0.23
PRKCAP17252 AC244669.2-201ENST00000612320 853 ntBASIC13.63□□□□□ -0.23
PRKCAP17252 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCAP17252 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
PRKCAP17252 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCAP17252 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCAP17252 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCAP17252 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCAP17252 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCAP17252 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCAP17252 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCAP17252 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCAP17252 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
PRKCAP17252 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
PRKCAP17252 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.63□□□□□ -0.23
PRKCAP17252 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCAP17252 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.63□□□□□ -0.23
PRKCAP17252 CLUHP2-201ENST00000426660 1303 ntBASIC13.63□□□□□ -0.23
PRKCAP17252 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCAP17252 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCAP17252 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCAP17252 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCAP17252 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCAP17252 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCAP17252 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCAP17252 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PRKCAP17252 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.62□□□□□ -0.23
PRKCAP17252 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PRKCAP17252 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PRKCAP17252 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PRKCAP17252 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PRKCAP17252 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PRKCAP17252 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PRKCAP17252 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PRKCAP17252 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PRKCAP17252 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
PRKCAP17252 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PRKCAP17252 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PRKCAP17252 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PRKCAP17252 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PRKCAP17252 TPM3P8-201ENST00000330554 643 ntBASIC13.62□□□□□ -0.23
PRKCAP17252 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.62□□□□□ -0.23
PRKCAP17252 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
PRKCAP17252 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
PRKCAP17252 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.62□□□□□ -0.23
PRKCAP17252 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.62□□□□□ -0.23
PRKCAP17252 AC007969.1-201ENST00000433675 447 ntBASIC13.62□□□□□ -0.23
PRKCAP17252 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.62□□□□□ -0.23
PRKCAP17252 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.62□□□□□ -0.23
PRKCAP17252 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
PRKCAP17252 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
PRKCAP17252 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.62□□□□□ -0.23
PRKCAP17252 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
PRKCAP17252 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.62□□□□□ -0.23
PRKCAP17252 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PRKCAP17252 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.62□□□□□ -0.23
PRKCAP17252 RNA5SP486-201ENST00000515961 83 ntBASIC13.62□□□□□ -0.23
PRKCAP17252 KRT90P-201ENST00000549264 1064 ntBASIC13.62□□□□□ -0.23
PRKCAP17252 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.62□□□□□ -0.23
PRKCAP17252 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.62□□□□□ -0.23
PRKCAP17252 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PRKCAP17252 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.62□□□□□ -0.23
PRKCAP17252 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.62□□□□□ -0.23
PRKCAP17252 ECM1P1-201ENST00000604092 1279 ntBASIC13.62□□□□□ -0.23
PRKCAP17252 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PRKCAP17252 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PRKCAP17252 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.62□□□□□ -0.23
PRKCAP17252 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PRKCAP17252 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.62□□□□□ -0.23
PRKCAP17252 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PRKCAP17252 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
PRKCAP17252 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
PRKCAP17252 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.62□□□□□ -0.23
PRKCAP17252 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
PRKCAP17252 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PRKCAP17252 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PRKCAP17252 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PRKCAP17252 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms