Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 FAM90A16P-201ENST00000526662 1395 ntBASIC16.12■□□□□ 0.17
COL11A1P12107 FAM90A9P-201ENST00000527940 1395 ntBASIC16.12■□□□□ 0.17
COL11A1P12107 FAM90A5P-201ENST00000528738 1395 ntBASIC16.12■□□□□ 0.17
COL11A1P12107 FAM90A14P-201ENST00000530386 1395 ntBASIC16.12■□□□□ 0.17
COL11A1P12107 FAM90A13P-201ENST00000534703 1395 ntBASIC16.12■□□□□ 0.17
COL11A1P12107 AC004554.1-201ENST00000422830 1468 ntBASIC16.12■□□□□ 0.17
COL11A1P12107 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COL11A1P12107 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL11A1P12107 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
COL11A1P12107 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL11A1P12107 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
COL11A1P12107 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL11A1P12107 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL11A1P12107 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.12■□□□□ 0.17
COL11A1P12107 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COL11A1P12107 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
COL11A1P12107 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC16.12■□□□□ 0.17
COL11A1P12107 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL11A1P12107 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COL11A1P12107 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL11A1P12107 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL11A1P12107 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.12■□□□□ 0.17
COL11A1P12107 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.12■□□□□ 0.17
COL11A1P12107 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL11A1P12107 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC16.12■□□□□ 0.17
COL11A1P12107 BAK1P1-201ENST00000317045 636 ntBASIC16.12■□□□□ 0.17
COL11A1P12107 SURF4-203ENST00000371991 715 ntTSL 3 BASIC16.12■□□□□ 0.17
COL11A1P12107 GEMIN8P4-201ENST00000380526 729 ntBASIC16.12■□□□□ 0.17
COL11A1P12107 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC16.12■□□□□ 0.17
COL11A1P12107 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL11A1P12107 AC106047.2-201ENST00000511723 743 ntBASIC16.12■□□□□ 0.17
COL11A1P12107 TREHP1-201ENST00000531328 465 ntBASIC16.12■□□□□ 0.17
COL11A1P12107 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COL11A1P12107 AL359091.4-201ENST00000610052 409 ntBASIC16.12■□□□□ 0.17
COL11A1P12107 FO393412.1-201ENST00000619841 382 ntBASIC16.12■□□□□ 0.17
COL11A1P12107 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
COL11A1P12107 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL11A1P12107 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL11A1P12107 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL11A1P12107 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL11A1P12107 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC16.12■□□□□ 0.17
COL11A1P12107 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
COL11A1P12107 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COL11A1P12107 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL11A1P12107 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL11A1P12107 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.11■□□□□ 0.17
COL11A1P12107 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL11A1P12107 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
COL11A1P12107 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
COL11A1P12107 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL11A1P12107 LINC00552-201ENST00000625151 2579 ntBASIC16.11■□□□□ 0.17
COL11A1P12107 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL11A1P12107 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC16.11■□□□□ 0.17
COL11A1P12107 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL11A1P12107 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.11■□□□□ 0.17
COL11A1P12107 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL11A1P12107 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL11A1P12107 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
COL11A1P12107 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC16.11■□□□□ 0.17
COL11A1P12107 AC092573.1-201ENST00000433054 884 ntBASIC16.11■□□□□ 0.17
COL11A1P12107 RPL35P9-201ENST00000446059 350 ntBASIC16.11■□□□□ 0.17
COL11A1P12107 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC16.11■□□□□ 0.17
COL11A1P12107 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL11A1P12107 HKR1-225ENST00000592168 566 ntTSL 4 BASIC16.11■□□□□ 0.17
COL11A1P12107 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
COL11A1P12107 HMGB1P24-201ENST00000611897 328 ntBASIC16.11■□□□□ 0.17
COL11A1P12107 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC16.11■□□□□ 0.17
COL11A1P12107 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.11■□□□□ 0.17
COL11A1P12107 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.11■□□□□ 0.17
COL11A1P12107 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL11A1P12107 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL11A1P12107 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC16.11■□□□□ 0.17
COL11A1P12107 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COL11A1P12107 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.11■□□□□ 0.17
COL11A1P12107 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL11A1P12107 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL11A1P12107 AL672207.1-201ENST00000328462 1570 ntBASIC16.11■□□□□ 0.17
COL11A1P12107 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COL11A1P12107 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL11A1P12107 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL11A1P12107 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL11A1P12107 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL11A1P12107 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL11A1P12107 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL11A1P12107 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL11A1P12107 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL11A1P12107 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COL11A1P12107 PIFO-201ENST00000369737 746 ntTSL 2 BASIC16.1■□□□□ 0.17
COL11A1P12107 AL135901.1-201ENST00000451812 333 ntBASIC16.1■□□□□ 0.17
COL11A1P12107 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC16.1■□□□□ 0.17
COL11A1P12107 AC024293.1-201ENST00000467930 498 ntBASIC16.1■□□□□ 0.17
COL11A1P12107 PRSS3P1-201ENST00000503996 742 ntBASIC16.1■□□□□ 0.17
COL11A1P12107 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC16.1■□□□□ 0.17
COL11A1P12107 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC16.1■□□□□ 0.17
COL11A1P12107 AL049840.2-201ENST00000602722 535 ntBASIC16.1■□□□□ 0.17
COL11A1P12107 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL11A1P12107 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
COL11A1P12107 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC16.1■□□□□ 0.17
COL11A1P12107 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.1■□□□□ 0.17
COL11A1P12107 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms