Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNB1P11230 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.76□□□□□ -0.05
CHRNB1P11230 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC14.76□□□□□ -0.05
CHRNB1P11230 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC14.76□□□□□ -0.05
CHRNB1P11230 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC14.76□□□□□ -0.05
CHRNB1P11230 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC14.76□□□□□ -0.05
CHRNB1P11230 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC14.76□□□□□ -0.05
CHRNB1P11230 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNB1P11230 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC14.76□□□□□ -0.05
CHRNB1P11230 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.76□□□□□ -0.05
CHRNB1P11230 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC14.76□□□□□ -0.05
CHRNB1P11230 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC14.76□□□□□ -0.05
CHRNB1P11230 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNB1P11230 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNB1P11230 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNB1P11230 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNB1P11230 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNB1P11230 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNB1P11230 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNB1P11230 AC007686.3-201ENST00000619017 3487 ntBASIC14.76□□□□□ -0.05
CHRNB1P11230 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNB1P11230 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CHRNB1P11230 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNB1P11230 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CHRNB1P11230 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CHRNB1P11230 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNB1P11230 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNB1P11230 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNB1P11230 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNB1P11230 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.75□□□□□ -0.05
CHRNB1P11230 LINC01815-202ENST00000641468 1409 ntBASIC14.75□□□□□ -0.05
CHRNB1P11230 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.75□□□□□ -0.05
CHRNB1P11230 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNB1P11230 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.75□□□□□ -0.05
CHRNB1P11230 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNB1P11230 WASH3P-207ENST00000560956 1394 ntBASIC14.75□□□□□ -0.05
CHRNB1P11230 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CHRNB1P11230 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
CHRNB1P11230 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.75□□□□□ -0.05
CHRNB1P11230 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNB1P11230 CR383656.2-201ENST00000548656 2254 ntBASIC14.75□□□□□ -0.05
CHRNB1P11230 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNB1P11230 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNB1P11230 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNB1P11230 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.75□□□□□ -0.05
CHRNB1P11230 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC14.75□□□□□ -0.05
CHRNB1P11230 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.75□□□□□ -0.05
CHRNB1P11230 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC14.75□□□□□ -0.05
CHRNB1P11230 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNB1P11230 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.75□□□□□ -0.05
CHRNB1P11230 PPOX-204ENST00000462866 473 ntTSL 5 BASIC14.75□□□□□ -0.05
CHRNB1P11230 AC010234.1-201ENST00000494599 870 ntBASIC14.75□□□□□ -0.05
CHRNB1P11230 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC14.75□□□□□ -0.05
CHRNB1P11230 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC14.75□□□□□ -0.05
CHRNB1P11230 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC14.75□□□□□ -0.05
CHRNB1P11230 MIR5196-201ENST00000578146 115 ntBASIC14.75□□□□□ -0.05
CHRNB1P11230 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC14.75□□□□□ -0.05
CHRNB1P11230 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC14.75□□□□□ -0.05
CHRNB1P11230 DBP-202ENST00000593500 712 ntTSL 2 BASIC14.75□□□□□ -0.05
CHRNB1P11230 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC14.75□□□□□ -0.05
CHRNB1P11230 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC14.75□□□□□ -0.05
CHRNB1P11230 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC14.75□□□□□ -0.05
CHRNB1P11230 LINC00431-202ENST00000636375 159 ntBASIC14.75□□□□□ -0.05
CHRNB1P11230 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNB1P11230 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNB1P11230 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.75□□□□□ -0.05
CHRNB1P11230 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNB1P11230 CICP20-201ENST00000443330 2801 ntBASIC14.75□□□□□ -0.05
CHRNB1P11230 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CHRNB1P11230 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNB1P11230 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNB1P11230 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNB1P11230 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNB1P11230 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CHRNB1P11230 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNB1P11230 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.75□□□□□ -0.05
CHRNB1P11230 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CHRNB1P11230 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNB1P11230 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CHRNB1P11230 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNB1P11230 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNB1P11230 AC112693.3-201ENST00000624819 1983 ntBASIC14.74□□□□□ -0.05
CHRNB1P11230 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNB1P11230 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNB1P11230 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNB1P11230 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNB1P11230 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNB1P11230 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNB1P11230 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.74□□□□□ -0.05
CHRNB1P11230 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNB1P11230 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNB1P11230 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNB1P11230 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNB1P11230 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.74□□□□□ -0.05
CHRNB1P11230 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNB1P11230 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNB1P11230 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNB1P11230 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC14.74□□□□□ -0.05
CHRNB1P11230 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNB1P11230 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms