Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.68■□□□□ 0.1
TUBB4AP04350 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.68■□□□□ 0.1
TUBB4AP04350 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.68■□□□□ 0.1
TUBB4AP04350 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TUBB4AP04350 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TUBB4AP04350 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
TUBB4AP04350 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.68■□□□□ 0.1
TUBB4AP04350 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBB4AP04350 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TUBB4AP04350 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
TUBB4AP04350 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TUBB4AP04350 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
TUBB4AP04350 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBB4AP04350 AL022313.4-201ENST00000562756 2046 ntBASIC15.68■□□□□ 0.1
TUBB4AP04350 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TUBB4AP04350 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TUBB4AP04350 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBB4AP04350 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBB4AP04350 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB4AP04350 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
TUBB4AP04350 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB4AP04350 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB4AP04350 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB4AP04350 AC008620.2-201ENST00000510294 1569 ntBASIC15.67■□□□□ 0.1
TUBB4AP04350 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBB4AP04350 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC15.67■□□□□ 0.1
TUBB4AP04350 TNN-202ENST00000621086 4234 ntTSL 5 BASIC15.67■□□□□ 0.1
TUBB4AP04350 GHET1-201ENST00000627071 1906 ntBASIC15.67■□□□□ 0.1
TUBB4AP04350 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB4AP04350 RPSAP43-201ENST00000402237 625 ntBASIC15.67■□□□□ 0.1
TUBB4AP04350 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.67■□□□□ 0.1
TUBB4AP04350 SDHAP3-202ENST00000515467 728 ntBASIC15.67■□□□□ 0.1
TUBB4AP04350 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB4AP04350 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBB4AP04350 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBB4AP04350 TP73-211ENST00000604074 4806 ntTSL 5 BASIC15.67■□□□□ 0.1
TUBB4AP04350 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB4AP04350 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB4AP04350 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB4AP04350 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB4AP04350 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB4AP04350 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBB4AP04350 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB4AP04350 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB4AP04350 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB4AP04350 PDIA3P1-201ENST00000471856 1510 ntBASIC15.67■□□□□ 0.1
TUBB4AP04350 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.67■□□□□ 0.1
TUBB4AP04350 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.67■□□□□ 0.1
TUBB4AP04350 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TUBB4AP04350 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB4AP04350 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB4AP04350 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC15.67■□□□□ 0.1
TUBB4AP04350 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB4AP04350 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.67■□□□□ 0.1
TUBB4AP04350 DRD5P1-201ENST00000456605 1438 ntBASIC15.67■□□□□ 0.1
TUBB4AP04350 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBB4AP04350 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB4AP04350 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB4AP04350 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB4AP04350 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
TUBB4AP04350 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB4AP04350 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB4AP04350 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBB4AP04350 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBB4AP04350 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBB4AP04350 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TUBB4AP04350 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TUBB4AP04350 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TUBB4AP04350 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.66■□□□□ 0.1
TUBB4AP04350 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBB4AP04350 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBB4AP04350 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
TUBB4AP04350 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBB4AP04350 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TUBB4AP04350 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC15.66■□□□□ 0.1
TUBB4AP04350 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBB4AP04350 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC15.66■□□□□ 0.1
TUBB4AP04350 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.66■□□□□ 0.1
TUBB4AP04350 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TUBB4AP04350 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TUBB4AP04350 MCCD1P2-201ENST00000423228 335 ntBASIC15.66■□□□□ 0.1
TUBB4AP04350 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.66■□□□□ 0.1
TUBB4AP04350 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.66■□□□□ 0.1
TUBB4AP04350 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
TUBB4AP04350 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TUBB4AP04350 AC026434.2-201ENST00000506094 1078 ntBASIC15.66■□□□□ 0.1
TUBB4AP04350 AC104506.1-201ENST00000609247 429 ntBASIC15.66■□□□□ 0.1
TUBB4AP04350 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.66■□□□□ 0.1
TUBB4AP04350 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
TUBB4AP04350 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBB4AP04350 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBB4AP04350 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBB4AP04350 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TUBB4AP04350 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBB4AP04350 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TUBB4AP04350 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC15.66■□□□□ 0.1
TUBB4AP04350 CICP1-201ENST00000416803 2410 ntBASIC15.66■□□□□ 0.1
TUBB4AP04350 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TUBB4AP04350 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBB4AP04350 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms