Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.73□□□□□ -0.05
GPC4O75487 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GPC4O75487 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
GPC4O75487 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GPC4O75487 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC14.73□□□□□ -0.05
GPC4O75487 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
GPC4O75487 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
GPC4O75487 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GPC4O75487 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GPC4O75487 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GPC4O75487 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GPC4O75487 FP325330.2-201ENST00000624219 5630 ntBASIC14.73□□□□□ -0.05
GPC4O75487 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GPC4O75487 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GPC4O75487 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
GPC4O75487 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GPC4O75487 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.73□□□□□ -0.05
GPC4O75487 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
GPC4O75487 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GPC4O75487 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC14.72□□□□□ -0.05
GPC4O75487 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.72□□□□□ -0.05
GPC4O75487 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GPC4O75487 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC14.72□□□□□ -0.05
GPC4O75487 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.72□□□□□ -0.05
GPC4O75487 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
GPC4O75487 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GPC4O75487 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GPC4O75487 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GPC4O75487 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GPC4O75487 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.72□□□□□ -0.05
GPC4O75487 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GPC4O75487 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GPC4O75487 U91328.1-201ENST00000437528 223 ntBASIC14.72□□□□□ -0.05
GPC4O75487 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
GPC4O75487 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.72□□□□□ -0.05
GPC4O75487 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.72□□□□□ -0.05
GPC4O75487 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.72□□□□□ -0.05
GPC4O75487 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GPC4O75487 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.72□□□□□ -0.05
GPC4O75487 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.72□□□□□ -0.05
GPC4O75487 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.72□□□□□ -0.05
GPC4O75487 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
GPC4O75487 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GPC4O75487 AC138466.3-201ENST00000619983 221 ntBASIC14.72□□□□□ -0.05
GPC4O75487 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.72□□□□□ -0.05
GPC4O75487 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GPC4O75487 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GPC4O75487 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
GPC4O75487 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.72□□□□□ -0.05
GPC4O75487 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GPC4O75487 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GPC4O75487 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.72□□□□□ -0.05
GPC4O75487 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
GPC4O75487 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GPC4O75487 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GPC4O75487 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
GPC4O75487 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GPC4O75487 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.72□□□□□ -0.05
GPC4O75487 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GPC4O75487 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GPC4O75487 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
GPC4O75487 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
GPC4O75487 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GPC4O75487 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GPC4O75487 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
GPC4O75487 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
GPC4O75487 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GPC4O75487 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GPC4O75487 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GPC4O75487 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GPC4O75487 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GPC4O75487 STRCP1-201ENST00000509801 5328 ntBASIC14.71□□□□□ -0.05
GPC4O75487 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.71□□□□□ -0.05
GPC4O75487 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GPC4O75487 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GPC4O75487 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC14.71□□□□□ -0.05
GPC4O75487 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GPC4O75487 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.71□□□□□ -0.05
GPC4O75487 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.71□□□□□ -0.05
GPC4O75487 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GPC4O75487 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.71□□□□□ -0.05
GPC4O75487 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.71□□□□□ -0.05
GPC4O75487 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
GPC4O75487 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.71□□□□□ -0.05
GPC4O75487 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
GPC4O75487 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GPC4O75487 TPM3P8-201ENST00000330554 643 ntBASIC14.71□□□□□ -0.05
GPC4O75487 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.71□□□□□ -0.05
GPC4O75487 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GPC4O75487 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
GPC4O75487 CD8B2-202ENST00000417670 633 ntBASIC14.71□□□□□ -0.05
GPC4O75487 ARSEP1-201ENST00000420443 635 ntBASIC14.71□□□□□ -0.05
GPC4O75487 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.71□□□□□ -0.05
GPC4O75487 AC007969.1-201ENST00000433675 447 ntBASIC14.71□□□□□ -0.05
GPC4O75487 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.71□□□□□ -0.05
GPC4O75487 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
GPC4O75487 KRT90P-201ENST00000549264 1064 ntBASIC14.71□□□□□ -0.05
GPC4O75487 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.71□□□□□ -0.05
GPC4O75487 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
GPC4O75487 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms