Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TRIM3O75382 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.71□□□□□ -0.21
TRIM3O75382 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.71□□□□□ -0.21
TRIM3O75382 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM3O75382 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM3O75382 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.71□□□□□ -0.21
TRIM3O75382 AL391280.1-201ENST00000506969 1062 ntBASIC13.71□□□□□ -0.21
TRIM3O75382 COX5BP1-201ENST00000507622 393 ntBASIC13.71□□□□□ -0.21
TRIM3O75382 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.71□□□□□ -0.21
TRIM3O75382 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.71□□□□□ -0.21
TRIM3O75382 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
TRIM3O75382 AP003171.2-201ENST00000528208 925 ntBASIC13.71□□□□□ -0.21
TRIM3O75382 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM3O75382 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM3O75382 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM3O75382 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.71□□□□□ -0.21
TRIM3O75382 RN7SL713P-201ENST00000582127 302 ntBASIC13.71□□□□□ -0.21
TRIM3O75382 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM3O75382 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.71□□□□□ -0.21
TRIM3O75382 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.71□□□□□ -0.21
TRIM3O75382 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.71□□□□□ -0.21
TRIM3O75382 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM3O75382 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TRIM3O75382 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TRIM3O75382 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM3O75382 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM3O75382 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM3O75382 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.71□□□□□ -0.22
TRIM3O75382 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.71□□□□□ -0.22
TRIM3O75382 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRIM3O75382 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.71□□□□□ -0.22
TRIM3O75382 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRIM3O75382 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRIM3O75382 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRIM3O75382 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.71□□□□□ -0.22
TRIM3O75382 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
TRIM3O75382 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.71□□□□□ -0.22
TRIM3O75382 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.71□□□□□ -0.22
TRIM3O75382 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.71□□□□□ -0.22
TRIM3O75382 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TRIM3O75382 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRIM3O75382 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TRIM3O75382 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.7□□□□□ -0.22
TRIM3O75382 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM3O75382 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM3O75382 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM3O75382 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM3O75382 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM3O75382 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM3O75382 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM3O75382 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.7□□□□□ -0.22
TRIM3O75382 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
TRIM3O75382 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM3O75382 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM3O75382 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM3O75382 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.7□□□□□ -0.22
TRIM3O75382 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.7□□□□□ -0.22
TRIM3O75382 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM3O75382 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM3O75382 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM3O75382 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM3O75382 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM3O75382 MIR1908-201ENST00000410394 80 ntBASIC13.7□□□□□ -0.22
TRIM3O75382 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.7□□□□□ -0.22
TRIM3O75382 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.7□□□□□ -0.22
TRIM3O75382 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.7□□□□□ -0.22
TRIM3O75382 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.7□□□□□ -0.22
TRIM3O75382 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.7□□□□□ -0.22
TRIM3O75382 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM3O75382 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.7□□□□□ -0.22
TRIM3O75382 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.7□□□□□ -0.22
TRIM3O75382 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM3O75382 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.7□□□□□ -0.22
TRIM3O75382 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM3O75382 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.7□□□□□ -0.22
TRIM3O75382 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.7□□□□□ -0.22
TRIM3O75382 RN7SL560P-201ENST00000577943 264 ntBASIC13.7□□□□□ -0.22
TRIM3O75382 AC073413.1-201ENST00000603927 732 ntBASIC13.7□□□□□ -0.22
TRIM3O75382 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.7□□□□□ -0.22
TRIM3O75382 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM3O75382 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM3O75382 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM3O75382 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM3O75382 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM3O75382 LINC01230-201ENST00000625222 3017 ntBASIC13.7□□□□□ -0.22
TRIM3O75382 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM3O75382 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM3O75382 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.7□□□□□ -0.22
TRIM3O75382 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.7□□□□□ -0.22
TRIM3O75382 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRIM3O75382 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM3O75382 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
TRIM3O75382 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TRIM3O75382 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM3O75382 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM3O75382 FKBP4P6-201ENST00000457486 1332 ntBASIC13.69□□□□□ -0.22
TRIM3O75382 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM3O75382 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM3O75382 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
TRIM3O75382 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms