Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.08□□□□□ -0.32
ZIC3O60481 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.08□□□□□ -0.32
ZIC3O60481 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.08□□□□□ -0.32
ZIC3O60481 AC008132.1-202ENST00000342005 1389 ntBASIC13.07□□□□□ -0.32
ZIC3O60481 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC3O60481 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC3O60481 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC3O60481 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.07□□□□□ -0.32
ZIC3O60481 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC3O60481 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.07□□□□□ -0.32
ZIC3O60481 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.07□□□□□ -0.32
ZIC3O60481 AP002353.1-201ENST00000528257 1599 ntBASIC13.07□□□□□ -0.32
ZIC3O60481 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC3O60481 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC3O60481 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.07□□□□□ -0.32
ZIC3O60481 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC3O60481 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.07□□□□□ -0.32
ZIC3O60481 AC007326.2-201ENST00000624224 7579 ntBASIC13.07□□□□□ -0.32
ZIC3O60481 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC3O60481 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC3O60481 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC3O60481 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC3O60481 AC239868.1-201ENST00000369385 493 ntBASIC13.07□□□□□ -0.32
ZIC3O60481 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
ZIC3O60481 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13.07□□□□□ -0.32
ZIC3O60481 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.07□□□□□ -0.32
ZIC3O60481 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.07□□□□□ -0.32
ZIC3O60481 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.07□□□□□ -0.32
ZIC3O60481 MIR3619-201ENST00000579667 83 ntBASIC13.07□□□□□ -0.32
ZIC3O60481 MIR3188-201ENST00000583494 85 ntBASIC13.07□□□□□ -0.32
ZIC3O60481 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.07□□□□□ -0.32
ZIC3O60481 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
ZIC3O60481 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
ZIC3O60481 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.07□□□□□ -0.32
ZIC3O60481 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.07□□□□□ -0.32
ZIC3O60481 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC3O60481 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
ZIC3O60481 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
ZIC3O60481 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.07□□□□□ -0.32
ZIC3O60481 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC3O60481 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
ZIC3O60481 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC3O60481 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC3O60481 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.07□□□□□ -0.32
ZIC3O60481 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
ZIC3O60481 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC3O60481 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
ZIC3O60481 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.07□□□□□ -0.32
ZIC3O60481 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC3O60481 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC3O60481 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC3O60481 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.07□□□□□ -0.32
ZIC3O60481 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC3O60481 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC3O60481 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.07□□□□□ -0.32
ZIC3O60481 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC3O60481 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.07□□□□□ -0.32
ZIC3O60481 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC3O60481 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC3O60481 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZIC3O60481 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ZIC3O60481 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZIC3O60481 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ZIC3O60481 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
ZIC3O60481 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.06□□□□□ -0.32
ZIC3O60481 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZIC3O60481 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZIC3O60481 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZIC3O60481 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZIC3O60481 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ZIC3O60481 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
ZIC3O60481 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
ZIC3O60481 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZIC3O60481 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZIC3O60481 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZIC3O60481 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.06□□□□□ -0.32
ZIC3O60481 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ZIC3O60481 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC13.06□□□□□ -0.32
ZIC3O60481 TSPY25P-201ENST00000429463 745 ntBASIC13.06□□□□□ -0.32
ZIC3O60481 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.06□□□□□ -0.32
ZIC3O60481 AC092580.1-201ENST00000433998 658 ntBASIC13.06□□□□□ -0.32
ZIC3O60481 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.06□□□□□ -0.32
ZIC3O60481 Z97180.1-201ENST00000445173 988 ntBASIC13.06□□□□□ -0.32
ZIC3O60481 AL596276.2-201ENST00000447525 331 ntBASIC13.06□□□□□ -0.32
ZIC3O60481 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.06□□□□□ -0.32
ZIC3O60481 RN7SL11P-201ENST00000471305 293 ntBASIC13.06□□□□□ -0.32
ZIC3O60481 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.06□□□□□ -0.32
ZIC3O60481 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC13.06□□□□□ -0.32
ZIC3O60481 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZIC3O60481 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZIC3O60481 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.06□□□□□ -0.32
ZIC3O60481 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13.06□□□□□ -0.32
ZIC3O60481 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.06□□□□□ -0.32
ZIC3O60481 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.06□□□□□ -0.32
ZIC3O60481 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.06□□□□□ -0.32
ZIC3O60481 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.06□□□□□ -0.32
ZIC3O60481 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.06□□□□□ -0.32
ZIC3O60481 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC13.06□□□□□ -0.32
ZIC3O60481 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
ZIC3O60481 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms