Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 TREML5P-201ENST00000421694 576 ntBASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 AC067863.1-201ENST00000494933 530 ntBASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 AC120045.2-201ENST00000567334 178 ntBASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 AC009407.1-201ENST00000568958 598 ntBASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 AL390955.2-201ENST00000603032 514 ntBASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 NUTM2HP-201ENST00000442076 2498 ntBASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 C1QBPP1-201ENST00000400117 770 ntBASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 TSSK5P-201ENST00000423978 907 ntBASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 AC134915.1-201ENST00000426461 574 ntBASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 AC004840.1-201ENST00000636359 365 ntBASIC10.21□□□□□ -0.77
UBE2D4Q9Y2X8 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.78
UBE2D4Q9Y2X8 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
UBE2D4Q9Y2X8 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
UBE2D4Q9Y2X8 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
UBE2D4Q9Y2X8 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
UBE2D4Q9Y2X8 AC114271.1-201ENST00000612689 2813 ntBASIC10.21□□□□□ -0.78
UBE2D4Q9Y2X8 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
UBE2D4Q9Y2X8 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
UBE2D4Q9Y2X8 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
UBE2D4Q9Y2X8 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
UBE2D4Q9Y2X8 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
UBE2D4Q9Y2X8 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.78
UBE2D4Q9Y2X8 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
UBE2D4Q9Y2X8 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
UBE2D4Q9Y2X8 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
UBE2D4Q9Y2X8 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
UBE2D4Q9Y2X8 TP73-207ENST00000378290 1831 ntTSL 2 BASIC10.21□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms