Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 ABCD1P4-201ENST00000399687 604 ntBASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 RN7SL494P-201ENST00000461517 304 ntBASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 RN7SL375P-201ENST00000492442 298 ntBASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 AC106047.2-201ENST00000511723 743 ntBASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 AL136982.5-201ENST00000605222 294 ntBASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 GARS-210ENST00000627489 324 ntTSL 4 BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHANK2Q9UPX8 PES1P2-201ENST00000449745 1735 ntBASIC21.06■□□□□ 0.96
SHANK2Q9UPX8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.06■□□□□ 0.96
SHANK2Q9UPX8 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
SHANK2Q9UPX8 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SHANK2Q9UPX8 FAM90A21P-201ENST00000510875 1396 ntBASIC21.06■□□□□ 0.96
SHANK2Q9UPX8 FAM90A15P-201ENST00000514465 1395 ntBASIC21.06■□□□□ 0.96
SHANK2Q9UPX8 FAM90A6P-201ENST00000515148 1394 ntBASIC21.06■□□□□ 0.96
SHANK2Q9UPX8 FAM90A16P-201ENST00000526662 1395 ntBASIC21.06■□□□□ 0.96
SHANK2Q9UPX8 FAM90A9P-201ENST00000527940 1395 ntBASIC21.06■□□□□ 0.96
SHANK2Q9UPX8 FAM90A5P-201ENST00000528738 1395 ntBASIC21.06■□□□□ 0.96
SHANK2Q9UPX8 FAM90A14P-201ENST00000530386 1395 ntBASIC21.06■□□□□ 0.96
SHANK2Q9UPX8 FAM90A13P-201ENST00000534703 1395 ntBASIC21.06■□□□□ 0.96
SHANK2Q9UPX8 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SHANK2Q9UPX8 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SHANK2Q9UPX8 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SHANK2Q9UPX8 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC21.06■□□□□ 0.96
SHANK2Q9UPX8 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SHANK2Q9UPX8 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SHANK2Q9UPX8 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.06■□□□□ 0.96
SHANK2Q9UPX8 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SHANK2Q9UPX8 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SHANK2Q9UPX8 AL365181.1-201ENST00000564032 1828 ntBASIC21.06■□□□□ 0.96
SHANK2Q9UPX8 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SHANK2Q9UPX8 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SHANK2Q9UPX8 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC21.06■□□□□ 0.96
SHANK2Q9UPX8 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC21.06■□□□□ 0.96
SHANK2Q9UPX8 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC21.06■□□□□ 0.96
SHANK2Q9UPX8 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
SHANK2Q9UPX8 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
SHANK2Q9UPX8 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SHANK2Q9UPX8 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC21.06■□□□□ 0.96
SHANK2Q9UPX8 AL139339.2-201ENST00000608063 657 ntBASIC21.06■□□□□ 0.96
SHANK2Q9UPX8 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC21.06■□□□□ 0.96
SHANK2Q9UPX8 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SHANK2Q9UPX8 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC21.05■□□□□ 0.96
SHANK2Q9UPX8 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SHANK2Q9UPX8 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SHANK2Q9UPX8 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC21.05■□□□□ 0.96
SHANK2Q9UPX8 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC21.05■□□□□ 0.96
SHANK2Q9UPX8 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SHANK2Q9UPX8 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
SHANK2Q9UPX8 AC008741.2-201ENST00000612792 3115 ntBASIC21.05■□□□□ 0.96
SHANK2Q9UPX8 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SHANK2Q9UPX8 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC21.05■□□□□ 0.96
SHANK2Q9UPX8 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SHANK2Q9UPX8 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC21.05■□□□□ 0.96
SHANK2Q9UPX8 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SHANK2Q9UPX8 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC21.05■□□□□ 0.96
SHANK2Q9UPX8 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC21.05■□□□□ 0.96
SHANK2Q9UPX8 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC21.05■□□□□ 0.96
SHANK2Q9UPX8 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC21.05■□□□□ 0.96
SHANK2Q9UPX8 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SHANK2Q9UPX8 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SHANK2Q9UPX8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SHANK2Q9UPX8 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHANK2Q9UPX8 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SHANK2Q9UPX8 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC21.04■□□□□ 0.96
SHANK2Q9UPX8 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC21.04■□□□□ 0.96
SHANK2Q9UPX8 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHANK2Q9UPX8 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHANK2Q9UPX8 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHANK2Q9UPX8 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC21.04■□□□□ 0.96
SHANK2Q9UPX8 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SHANK2Q9UPX8 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC21.04■□□□□ 0.96
SHANK2Q9UPX8 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
SHANK2Q9UPX8 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
SHANK2Q9UPX8 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SHANK2Q9UPX8 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC21.04■□□□□ 0.96
SHANK2Q9UPX8 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC21.04■□□□□ 0.96
SHANK2Q9UPX8 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC21.04■□□□□ 0.96
SHANK2Q9UPX8 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
SHANK2Q9UPX8 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC21.04■□□□□ 0.96
SHANK2Q9UPX8 F11R-204ENST00000537746 1245 ntTSL 2 BASIC21.04■□□□□ 0.96
SHANK2Q9UPX8 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC21.04■□□□□ 0.96
SHANK2Q9UPX8 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHANK2Q9UPX8 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC21.04■□□□□ 0.96
SHANK2Q9UPX8 AP005264.6-204ENST00000588436 719 ntBASIC21.04■□□□□ 0.96
SHANK2Q9UPX8 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC21.04■□□□□ 0.96
SHANK2Q9UPX8 BAP1-211ENST00000615113 489 ntBASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms