Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
DNMT3BQ9UBC3 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
DNMT3BQ9UBC3 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC15.13■□□□□ 0.01
DNMT3BQ9UBC3 AL627389.1-201ENST00000413508 1182 ntBASIC15.13■□□□□ 0.01
DNMT3BQ9UBC3 RPL13AP19-201ENST00000434320 584 ntBASIC15.13■□□□□ 0.01
DNMT3BQ9UBC3 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC15.13■□□□□ 0.01
DNMT3BQ9UBC3 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
DNMT3BQ9UBC3 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC15.13■□□□□ 0.01
DNMT3BQ9UBC3 IGHV3-37-201ENST00000518544 340 ntBASIC15.13■□□□□ 0.01
DNMT3BQ9UBC3 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC15.13■□□□□ 0.01
DNMT3BQ9UBC3 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.13■□□□□ 0.01
DNMT3BQ9UBC3 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC15.13■□□□□ 0.01
DNMT3BQ9UBC3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
DNMT3BQ9UBC3 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC15.13■□□□□ 0.01
DNMT3BQ9UBC3 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC15.13■□□□□ 0.01
DNMT3BQ9UBC3 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
DNMT3BQ9UBC3 AC107464.3-201ENST00000609172 737 ntBASIC15.13■□□□□ 0.01
DNMT3BQ9UBC3 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
DNMT3BQ9UBC3 MIR6858-201ENST00000620733 67 ntBASIC15.13■□□□□ 0.01
DNMT3BQ9UBC3 AL161773.1-201ENST00000624845 863 ntBASIC15.13■□□□□ 0.01
DNMT3BQ9UBC3 AC005618.3-201ENST00000624928 458 ntBASIC15.13■□□□□ 0.01
DNMT3BQ9UBC3 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
DNMT3BQ9UBC3 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
DNMT3BQ9UBC3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
DNMT3BQ9UBC3 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
DNMT3BQ9UBC3 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
DNMT3BQ9UBC3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
DNMT3BQ9UBC3 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
DNMT3BQ9UBC3 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 HIST2H2BA-201ENST00000412169 381 ntBASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 AC092580.1-201ENST00000433998 658 ntBASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 AC018463.1-201ENST00000456674 917 ntBASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 BUD31-205ENST00000456893 512 ntTSL 5 BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 TMCO5B-205ENST00000530020 894 ntBASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 KRT8P1-201ENST00000557533 1207 ntBASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 MT3-203ENST00000565838 421 ntTSL 3 BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.12■□□□□ 0.01
DNMT3BQ9UBC3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DNMT3BQ9UBC3 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.11■□□□□ 0.01
DNMT3BQ9UBC3 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
DNMT3BQ9UBC3 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DNMT3BQ9UBC3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.11■□□□□ 0.01
DNMT3BQ9UBC3 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
DNMT3BQ9UBC3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
DNMT3BQ9UBC3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.11■□□□□ 0.01
DNMT3BQ9UBC3 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.11■□□□□ 0.01
DNMT3BQ9UBC3 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
DNMT3BQ9UBC3 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.11■□□□□ 0.01
DNMT3BQ9UBC3 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC15.11■□□□□ 0.01
DNMT3BQ9UBC3 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC15.11■□□□□ 0.01
DNMT3BQ9UBC3 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
DNMT3BQ9UBC3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.11■□□□□ 0.01
DNMT3BQ9UBC3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.11■□□□□ 0.01
DNMT3BQ9UBC3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
DNMT3BQ9UBC3 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DNMT3BQ9UBC3 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
DNMT3BQ9UBC3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
DNMT3BQ9UBC3 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms