Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 MYADML-201ENST00000474610 2147 ntBASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 USP4-203ENST00000415188 1454 ntTSL 3 BASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 AC090505.1-201ENST00000430515 1834 ntBASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 AC008805.1-201ENST00000590892 364 ntBASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 MIR6720-201ENST00000611664 98 ntBASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPAP1Q9BWH6 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPAP1Q9BWH6 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPAP1Q9BWH6 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPAP1Q9BWH6 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RPAP1Q9BWH6 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPAP1Q9BWH6 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPAP1Q9BWH6 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPAP1Q9BWH6 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPAP1Q9BWH6 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17.63■□□□□ 0.41
RPAP1Q9BWH6 AC006480.2-201ENST00000609770 1337 ntBASIC17.63■□□□□ 0.41
RPAP1Q9BWH6 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RPAP1Q9BWH6 AC139712.1-201ENST00000378256 1875 ntBASIC17.63■□□□□ 0.41
RPAP1Q9BWH6 ADK-205ENST00000539909 1866 ntTSL 2 BASIC17.63■□□□□ 0.41
RPAP1Q9BWH6 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPAP1Q9BWH6 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RPAP1Q9BWH6 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPAP1Q9BWH6 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.63■□□□□ 0.41
RPAP1Q9BWH6 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC17.63■□□□□ 0.41
RPAP1Q9BWH6 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RPAP1Q9BWH6 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC17.63■□□□□ 0.41
RPAP1Q9BWH6 AC073150.1-201ENST00000450406 1084 ntBASIC17.63■□□□□ 0.41
RPAP1Q9BWH6 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.63■□□□□ 0.41
RPAP1Q9BWH6 LDHBP1-201ENST00000455730 1119 ntBASIC17.63■□□□□ 0.41
RPAP1Q9BWH6 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC17.63■□□□□ 0.41
RPAP1Q9BWH6 IRF3-215ENST00000596822 823 ntTSL 3 BASIC17.63■□□□□ 0.41
RPAP1Q9BWH6 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RPAP1Q9BWH6 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPAP1Q9BWH6 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RPAP1Q9BWH6 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPAP1Q9BWH6 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPAP1Q9BWH6 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC17.63■□□□□ 0.41
RPAP1Q9BWH6 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPAP1Q9BWH6 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 RTN3P1-201ENST00000536295 711 ntBASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 AC005962.1-201ENST00000584100 773 ntBASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 AC009884.2-201ENST00000603110 324 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms