Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 AC025186.1-201ENST00000478174 870 ntBASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 NAMA-206ENST00000605377 509 ntTSL 5 BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 FMO6P-201ENST00000236166 1620 ntBASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDK5RAP2Q96SN8 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC16.74■□□□□ 0.27
CDK5RAP2Q96SN8 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDK5RAP2Q96SN8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
CDK5RAP2Q96SN8 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC16.74■□□□□ 0.27
CDK5RAP2Q96SN8 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CDK5RAP2Q96SN8 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDK5RAP2Q96SN8 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDK5RAP2Q96SN8 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDK5RAP2Q96SN8 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDK5RAP2Q96SN8 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CDK5RAP2Q96SN8 OR52M2P-201ENST00000414298 959 ntBASIC16.74■□□□□ 0.27
CDK5RAP2Q96SN8 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CDK5RAP2Q96SN8 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC16.74■□□□□ 0.27
CDK5RAP2Q96SN8 CD81-209ENST00000492627 886 ntTSL 3 BASIC16.74■□□□□ 0.27
CDK5RAP2Q96SN8 CD44-224ENST00000526669 870 ntTSL 5 BASIC16.74■□□□□ 0.27
CDK5RAP2Q96SN8 RN7SL470P-201ENST00000583069 259 ntBASIC16.74■□□□□ 0.27
CDK5RAP2Q96SN8 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDK5RAP2Q96SN8 DBP-202ENST00000593500 712 ntTSL 2 BASIC16.74■□□□□ 0.27
CDK5RAP2Q96SN8 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CDK5RAP2Q96SN8 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC16.74■□□□□ 0.27
CDK5RAP2Q96SN8 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC16.74■□□□□ 0.27
CDK5RAP2Q96SN8 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDK5RAP2Q96SN8 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDK5RAP2Q96SN8 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDK5RAP2Q96SN8 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.74■□□□□ 0.27
CDK5RAP2Q96SN8 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC16.74■□□□□ 0.27
CDK5RAP2Q96SN8 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDK5RAP2Q96SN8 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDK5RAP2Q96SN8 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC16.74■□□□□ 0.27
CDK5RAP2Q96SN8 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDK5RAP2Q96SN8 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDK5RAP2Q96SN8 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC16.74■□□□□ 0.27
CDK5RAP2Q96SN8 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDK5RAP2Q96SN8 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.74■□□□□ 0.27
CDK5RAP2Q96SN8 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 AL592076.1-201ENST00000424448 303 ntBASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 KRT18P15-201ENST00000458108 1291 ntBASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 AC145285.5-201ENST00000562217 361 ntBASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 AC007250.1-201ENST00000608934 338 ntBASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 AC090643.2-201ENST00000623442 2029 ntBASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDK5RAP2Q96SN8 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms