Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR1H4Q96RI1 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR1H4Q96RI1 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR1H4Q96RI1 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR1H4Q96RI1 AC027369.3-201ENST00000530465 3707 ntBASIC13.81□□□□□ -0.2
NR1H4Q96RI1 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR1H4Q96RI1 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NR1H4Q96RI1 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NR1H4Q96RI1 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
NR1H4Q96RI1 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR1H4Q96RI1 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
NR1H4Q96RI1 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
NR1H4Q96RI1 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR1H4Q96RI1 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC13.81□□□□□ -0.2
NR1H4Q96RI1 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
NR1H4Q96RI1 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR1H4Q96RI1 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR1H4Q96RI1 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR1H4Q96RI1 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR1H4Q96RI1 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR1H4Q96RI1 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 AL805961.2-201ENST00000642139 4817 ntBASIC13.8□□□□□ -0.2
NR1H4Q96RI1 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 RHOQP3-201ENST00000437982 621 ntBASIC13.8□□□□□ -0.2
NR1H4Q96RI1 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 RNA5SP419-201ENST00000515908 135 ntBASIC13.8□□□□□ -0.2
NR1H4Q96RI1 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 AC104109.2-201ENST00000602919 1418 ntBASIC13.8□□□□□ -0.2
NR1H4Q96RI1 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR1H4Q96RI1 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC13.79□□□□□ -0.2
NR1H4Q96RI1 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms