Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
CSPG4P5Q96PW8 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.03■□□□□ -0
CSPG4P5Q96PW8 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CSPG4P5Q96PW8 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CSPG4P5Q96PW8 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CSPG4P5Q96PW8 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.02■□□□□ -0
CSPG4P5Q96PW8 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.02■□□□□ -0
CSPG4P5Q96PW8 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CSPG4P5Q96PW8 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.02■□□□□ -0
CSPG4P5Q96PW8 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
CSPG4P5Q96PW8 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.02■□□□□ -0
CSPG4P5Q96PW8 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CSPG4P5Q96PW8 AL022313.4-201ENST00000562756 2046 ntBASIC15.02■□□□□ -0
CSPG4P5Q96PW8 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.02■□□□□ -0
CSPG4P5Q96PW8 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CSPG4P5Q96PW8 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.02■□□□□ -0
CSPG4P5Q96PW8 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CSPG4P5Q96PW8 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.02■□□□□ -0
CSPG4P5Q96PW8 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.02■□□□□ -0
CSPG4P5Q96PW8 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CSPG4P5Q96PW8 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CSPG4P5Q96PW8 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CSPG4P5Q96PW8 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.02■□□□□ -0
CSPG4P5Q96PW8 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CSPG4P5Q96PW8 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.02■□□□□ -0
CSPG4P5Q96PW8 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.02■□□□□ -0
CSPG4P5Q96PW8 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CSPG4P5Q96PW8 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.02■□□□□ -0
CSPG4P5Q96PW8 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.02■□□□□ -0
CSPG4P5Q96PW8 ATP5G2P4-201ENST00000442175 420 ntBASIC15.02■□□□□ -0
CSPG4P5Q96PW8 HSPB1P2-201ENST00000448722 546 ntBASIC15.02■□□□□ -0
CSPG4P5Q96PW8 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.02■□□□□ -0
CSPG4P5Q96PW8 RPSAP36-202ENST00000494591 1261 ntBASIC15.02■□□□□ -0
CSPG4P5Q96PW8 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.02■□□□□ -0
CSPG4P5Q96PW8 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.02■□□□□ -0
CSPG4P5Q96PW8 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.02■□□□□ -0
CSPG4P5Q96PW8 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CSPG4P5Q96PW8 RBM8B-201ENST00000555532 525 ntBASIC15.02■□□□□ -0
CSPG4P5Q96PW8 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.02■□□□□ -0
CSPG4P5Q96PW8 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.02■□□□□ -0
CSPG4P5Q96PW8 AC239800.4-201ENST00000603712 296 ntBASIC15.02■□□□□ -0
CSPG4P5Q96PW8 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CSPG4P5Q96PW8 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.02□□□□□ -0.01
CSPG4P5Q96PW8 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CSPG4P5Q96PW8 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CSPG4P5Q96PW8 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CSPG4P5Q96PW8 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CSPG4P5Q96PW8 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CSPG4P5Q96PW8 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
CSPG4P5Q96PW8 KRT8P24-201ENST00000560290 1559 ntBASIC15.02□□□□□ -0.01
CSPG4P5Q96PW8 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CSPG4P5Q96PW8 REXO1L6P-201ENST00000603433 1515 ntBASIC15.02□□□□□ -0.01
CSPG4P5Q96PW8 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CSPG4P5Q96PW8 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.02□□□□□ -0.01
CSPG4P5Q96PW8 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CSPG4P5Q96PW8 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
CSPG4P5Q96PW8 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 FAM58BP-201ENST00000439056 645 ntBASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 AC012441.2-201ENST00000444843 739 ntBASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 Z93015.1-201ENST00000451718 390 ntBASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 AC009884.2-201ENST00000603110 324 ntBASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 AC005840.4-201ENST00000541242 2494 ntBASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CSPG4P5Q96PW8 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15□□□□□ -0.01
CSPG4P5Q96PW8 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15□□□□□ -0.01
CSPG4P5Q96PW8 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSPG4P5Q96PW8 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms